Fitness data for BPHYT_RS27970 in Burkholderia phytofirmans PsJN

sugar ABC transporter permease
SEED: Dihydroxyacetone ABC transport system, permease protein
KEGG: multiple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 36hr PHYTO2 MOI 0.1 -1.5 -2.6 compare
phage 36hr PHYTO3 MOI 1 -1.0 -1.9 compare
phage 24hr PHYTO MOI 0.1 -1.0 -1.5 compare
phage 24hr PHYTO MOI 0.1 -1.0 -1.8 compare
phage 24hr PHYTO3 MOI 0.1 -1.0 -1.9 compare
phage 36hr PHYTO3 MOI 0.1 -1.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.2 compare
phage P. phyto PHYTO2 MOI 1 -0.9 -1.1 compare
phage 36hr PHYTO2 MOI 1 -0.9 -1.2 compare
phage 24hr PHYTO6 MOI 0.1 -0.9 -2.2 compare
phage P. phyto corn MOI 0.1 -0.8 -2.3 compare
nophagecontrol 24hr Phyto Lib Only -0.7 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.7 compare
phage 24hr PHYTO3 MOI 1 -0.7 -0.9 compare
phage 24hr PHYTO10 MOI 10 -0.7 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +0.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1 +1.8 compare