Fitness data for BPHYT_RS22920 in Burkholderia phytofirmans PsJN

pilus assembly protein CpaF
SEED: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
KEGG: pilus assembly protein CpaF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source L-Citrulline (N) -0.7 -2.6 compare
phage 24hr PHYTO10 MOI 10 -0.6 -1.9 compare
phage 24hr PHYTO6 MOI 10 -0.6 -2.5 compare
motility outer cut, LB soft agar motility assay -0.6 -2.0 compare
nophagecontrol 36hr Phyto Lib Only -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.0 compare
phage 36hr PHYTO MOI 0.1 -0.5 -1.2 compare
nophagecontrol 24hr Phyto Lib Only -0.5 -1.4 compare
phage 36hr PHYTO6 MOI 1 -0.5 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.1 compare
phage 24hr PHYTO2 MOI 0.1 -0.5 -2.0 compare
carbon source Putrescine (C) -0.5 -2.7 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.4 -0.9 compare
phage 36hr PHYTO3 MOI 1 -0.4 -1.0 compare
phage 24hr PHYTO1 MOI 10 +0.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.1 compare