Fitness data for BPHYT_RS20410 in Burkholderia phytofirmans PsJN

glucarate dehydratase
SEED: Glucarate dehydratase (EC 4.2.1.40)
KEGG: glucarate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. phyto PHYTO2 MOI 1 -1.4 -1.7 compare
phage 36hr PHYTO3 MOI 1 -1.1 -2.4 compare
phage 24hr PHYTO6 MOI 0.1 -1.0 -3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.4 compare
phage P. phyto corn MOI 0.1 -0.9 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.8 -1.7 compare
carbon source D-Glucose (C) -0.8 -2.6 compare
phage 36hr PHYTO1 MOI 1 -0.7 -2.2 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.7 -1.4 compare
phage 36hr PHYTO4 MOI 0.1 -0.7 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -2.1 compare
phage 36hr PHYTO10 MOI 10 +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.3 compare
nitrogen source Uridine (N) +0.7 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.0 compare
phage 24hr PHYTO10 MOI 1 +0.7 +2.3 compare
phage 36hr PHYTO9 MOI 0.1 +0.7 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +3.1 compare