Fitness data for ABZR87_RS21245 in Ralstonia sp. UNC404CL21Col

1,2-phenylacetyl-CoA epoxidase subunit PaaD
SEED: Phenylacetate-CoA oxygenase, PaaJ subunit
KEGG: phenylacetic acid degradation protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
soil soil EcoFAB sample 1; outgrowth in LB -5.1 -0.9 compare
soil soil EcoFAB sample 2; outgrowth in LB -5.0 -1.6 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -3.6 -1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.1 -0.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.8 -1.0 compare
nitrogen source nitrogen source nitrite 5mM -1.7 -1.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.6 -0.9 compare
carbon source butyrate (C) -1.5 -1.2 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.5 -1.2 compare
rhizosphere rhizosphere sample 7; outgrowth in LB -1.4 -1.1 compare
rhizosphere rhizosphere sample 5; outgrowth in LB -1.4 -1.2 compare
rhizosphere rhizosphere sample 4; outgrowth in LB -1.2 -1.1 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -1.2 -0.6 compare
carbon source propionate (C) -1.2 -1.2 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.2 -0.5 compare
root root sample 5; outgrowth in LB -1.1 -0.6 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +1.0 +1.8 compare
carbon source Octanoic (C) +1.1 +0.9 compare
nitrogen source nitrogen source nitrate 5mM +1.1 +1.4 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +1.2 +2.1 compare