Pairwise Alignments

Query, 460 a.a., sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

Subject, 485 a.a., Integral membrane sensor signal transduction histidine kinase , glucose catabolism cluster from Pseudomonas sp. S08-1

 Score =  167 bits (423), Expect = 7e-46
 Identities = 150/495 (30%), Positives = 232/495 (46%), Gaps = 63/495 (12%)

Query: 2   NRLRVLWP--RKMVHQLSVLLLLALLASNAIAMLV-------------LQRTGALIHPLS 46
           +RLR L P  R ++ ++ +L LL +L + A++ L+             L  T +L H +S
Sbjct: 6   SRLRRLLPVPRSLLGRMLLLTLLVVLVAQALSSLIWVSQLRASQMDGLLTSTRSLAHSMS 65

Query: 47  RTMSLERLVTAHHAAL---EAPNQVGARLLASMITPDAHFWIDRRADVEPFDMRAEEQRL 103
            ++S  R +      +   +  +  G R   S+        +D +   E    RA    +
Sbjct: 66  ASVSYFRSLPLGFRPMVLDQLRSMGGTRFFVSLNDKP----LDMQVLPETPRKRAVLAEV 121

Query: 104 ANVLRERLQLAPDLAVVM----QLERVTGGHARDQVFSPAGWA----------PLRLRSS 149
             VLR+ L    DL V       L    G    D+V  P  WA          P  L + 
Sbjct: 122 DAVLRQNLGRNVDLLVQFVSPEDLRIFNGELKLDEV--PRSWAHYALSLEPLNPPVLVTQ 179

Query: 150 IELPDGRYL---NALQHPVGAYE---------WRKVLTYSLPVTIIPVLLIVMFCISRVV 197
           I +    +L   + +  P  + E         W   LT S       +LL +   +    
Sbjct: 180 IRIAPNEWLYLASLMPAPYVSLEDEGLPMQQVWFIFLTSSF------LLLFIGILVHWQS 233

Query: 198 QPVKTLVQASERVSRGEWIAPLPLTGPQEARDLTAAFNHMQASIARHVEGRTRMLAAISH 257
           +P+K L  A+  +S G  + P+   G  E  +++ AFN M+  I+R++  R+++ +AISH
Sbjct: 234 RPLKRLASAAREMSLGASVEPVEEAGGSEVVEVSRAFNTMRERISRYLSERSQLFSAISH 293

Query: 258 DLNTPITELRLQVELLEEGDAREDMLESLEELSLMVRETLNFVREDAVQEPTLTISLNGL 317
           DL TPIT LRL+VELLE+   +      L++L L+V+  L  V++  + E    + LN L
Sbjct: 294 DLRTPITRLRLRVELLEDEALQAKFSRDLDDLELLVKGALQCVKDTDIHENIEQVDLNHL 353

Query: 318 LDDLAKRYQLLNQPVTWHGAPPIMLTCRPLALKRALTNLIDNALRHAGDATLSLCREDAG 377
           L  L + Y L N  VT  GA       +PLAL+R + NL+DNAL++   A L +  +D  
Sbjct: 354 LHGLIEPY-LGNGQVTLQGAAQDGYPGKPLALRRCIGNLVDNALKYGQRAHLHI-EDDRT 411

Query: 378 TVRLDILDHGAGLPDAWLSRVFEPFVQFAGGTADGHKGGVGLGLAIARACVQAHGGELLL 437
              L + D G G+P+  L +VFEP  + A     G + G GLGL IAR+   +HGGE+ L
Sbjct: 412 AFVLHVDDEGPGVPEQRLEQVFEPHFRLA-----GQQQGYGLGLGIARSLAHSHGGEVTL 466

Query: 438 ENRPSAGLCAVVRLP 452
           +N    GL   +RLP
Sbjct: 467 QNLREGGLRVTLRLP 481