Pairwise Alignments

Query, 460 a.a., sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

Subject, 489 a.a., HAMP domain-containing protein from Pseudomonas fluorescens SBW25

 Score =  170 bits (431), Expect = 8e-47
 Identities = 138/487 (28%), Positives = 235/487 (48%), Gaps = 42/487 (8%)

Query: 3   RLRVLWPRKMVHQLSVLLLLALLASNAIAMLV-------------LQRTGALIHPLSRTM 49
           R R   PR ++ ++ +L LLA+L + A++ ++             +    +L H ++ ++
Sbjct: 10  RRRFPVPRSLLGRMLLLTLLAVLFAQALSSVIWVSQLRATQLEGLVTSARSLAHSMTASV 69

Query: 50  SLERLVTAHHAAL---EAPNQVGARLLASMITPDAHFWIDRRADVEPFDMRAEEQRLANV 106
           S  R +   +  L   +  +  G R + ++        I  +   +   + A ++ L   
Sbjct: 70  SYFRSLPVAYRPLVLDQLRSMGGTRFVVTLNDRPLDMAILPQTPRKQAVLEAVDEVLKQT 129

Query: 107 LRERLQLAPDLAVVMQLERVTGGHARDQVFSPAGWA----------PLRLRSSIELPDGR 156
           L   + ++ +      L     G   D++  P  WA          P  L + I+L  G 
Sbjct: 130 LGADVHMSVEFVSAEDLRIFNAGLKLDEL--PRSWAHYALTLEPVNPPVLVTQIQLAQGE 187

Query: 157 YL---NALQHPVGAYEWRKVLTYSLPVTIIP---VLLIVMFCISRVVQPVKTLVQASERV 210
           +L   + L  P  + E + + +  +   ++    +LL +   +    +P+K L +A+  +
Sbjct: 188 WLYIASLLPEPYTSLEEQGLPSQQVWFIVLTSGFLLLFIGLLVHWQSRPLKRLARAARDM 247

Query: 211 SRGEWIAPLPLTGPQEARDLTAAFNHMQASIARHVEGRTRMLAAISHDLNTPITELRLQV 270
           S G  + P+   G  E  ++  AFN M+  I+R++  R+++ +AISHDL TPIT LRL+V
Sbjct: 248 SLGADVEPVAEGGGSEVVEVGRAFNAMRERISRYLTERSQLFSAISHDLRTPITRLRLRV 307

Query: 271 ELLEEGDAREDMLESLEELSLMVRETLNFVREDAVQEPTLTISLNGLLDDLAKRYQLL-- 328
           ELLE+ + +      L+EL L+V+  L  V++  + E    + LN +LD L + Y     
Sbjct: 308 ELLEDENLQAKFGRDLDELELLVKGALQCVKDTDIHENIEPVDLNHVLDCLVEPYLAPNG 367

Query: 329 NQPVTWHGAPPIMLTCRPLALKRALTNLIDNALRHAGDATLSLCREDAGTVRLDILDHGA 388
           N  VT HG        +PLALKR + NLIDNAL++  +A L +  +D     L + D G 
Sbjct: 368 NGRVTQHGRALTTYPGKPLALKRCIGNLIDNALKYGQNAHLHI-EDDGAEFILHVDDEGP 426

Query: 389 GLPDAWLSRVFEPFVQFAGGTADGHKGGVGLGLAIARACVQAHGGELLLENRPSAGLCAV 448
           G+P+  L +VFEP  + A     G + G GLGL IAR    +HGGE+ L+N    GL   
Sbjct: 427 GVPEQRLEQVFEPHFRLA-----GQQQGYGLGLGIARNIAHSHGGEVSLQNLREGGLRVT 481

Query: 449 VRLPAAL 455
           ++LP  L
Sbjct: 482 LQLPRGL 488