Pairwise Alignments

Query, 426 a.a., PhaK-like protein from Pseudomonas fluorescens FW300-N2E2

Subject, 417 a.a., porin from Pseudomonas fluorescens FW300-N2C3

 Score =  283 bits (724), Expect = 7e-81
 Identities = 154/396 (38%), Positives = 222/396 (56%), Gaps = 13/396 (3%)

Query: 38  GFVDGAKATLNLRNAYINRNFTNPN--------VAQGKAEEWTQNFILDAKSGFTQGVVG 89
           GF+D +K  L LRN Y N NF + +         A+ +  EW Q F+LD +SGFT G +G
Sbjct: 26  GFIDDSKLKLQLRNVYFNENFRDEHGMSARAARTAKSERTEWAQGFLLDYQSGFTPGTLG 85

Query: 90  FGVDVLGTYSLKLDGGRGTAGTQLLPVHDDGRPADDFGRLGVALKAKVSKTELKVGEWMP 149
           FGVD LG   +KLD GRG +GT LLPVHDDGR AD+F   G+  KA+++KT LK G  +P
Sbjct: 86  FGVDALGLLGVKLDSGRGRSGTGLLPVHDDGRAADEFASAGMTAKARLAKTTLKYGTLLP 145

Query: 150 VLPILRSDDGRSLPQTFRGGQVTSTEINGLSLYGGQFRANSPRNDASMEDMSMNGRGAFT 209
             P+L  +D R LPQT++G Q++S +I+ L++ GG       R+ +    +  +G G   
Sbjct: 146 KTPVLVYNDARLLPQTYQGTQISSNDIDNLTVTGGHLERFKLRDSSDSMPIVPDGYGGDK 205

Query: 210 SDRFNFGGGEYAFNEKRTQVGVWYAELSDIYQQQYFNLTHSQPIGDWTLGANLGYFIGKE 269
           S  F++ G +Y    K  ++  +Y EL + Y+Q +  + H  P+G   L ++L YF   +
Sbjct: 206 SGDFSYAGADYKLG-KHIRLSYFYGELENFYRQNFVGIQHDLPLGAGVLTSDLRYFNSVD 264

Query: 270 DGSALAGDLDNKTAFAMLSAKYGGNTFYVGLQKVGGDDAWMRVNGTSGGTLANDSYNSSY 329
            GSA  G +DN      LS    G+T   G Q + G+     V+G +  + +N      +
Sbjct: 265 SGSAYGGKIDNDMLSGSLSYAVVGHTLSAGYQTLSGEAGLPYVSGATVYSFSNVGI-GKF 323

Query: 330 DNAKEKSWQLRHDFNFAAVGVPGLTLMNRYISGDNVHTATVDDGKEWGRETELAYTVQSG 389
               EK+W L + ++FA +GVPGLT   RY+SG++  + T    KEW R+ E+AY VQ G
Sbjct: 324 IEEDEKTWMLGYGYDFARLGVPGLTFSTRYLSGNDGKSDTA--VKEWERDAEIAYVVQQG 381

Query: 390 ALKNLNVKWRNASIRRDFSTNEFDENRIFINYPISL 425
             K L VK RN   R DFS    D NR++  Y I+L
Sbjct: 382 TFKGLGVKLRNYVYRSDFSRGR-DSNRVYFTYDIAL 416