Pairwise Alignments

Query, 426 a.a., PhaK-like protein from Pseudomonas fluorescens FW300-N2E2

Subject, 423 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  561 bits (1447), Expect = e-164
 Identities = 276/422 (65%), Positives = 321/422 (76%), Gaps = 7/422 (1%)

Query: 11  PAHPSLISLTLALCA--GSSAVVQADQNSGFVDGAKATLNLRNAYINRNFTNPNVAQGKA 68
           P  PS ++L    C    S     + Q  GF+D AK +LNLRN YINRNF +P+ AQ K 
Sbjct: 3   PRTPSSVALFAGGCMTLASLGFTASAQAEGFIDDAKLSLNLRNFYINRNFVDPDYAQSKG 62

Query: 69  EEWTQNFILDAKSGFTQGVVGFGVDVLGTYSLKLDGGRGTAGTQLLPVHD---DGRPADD 125
           EEWTQ+FIL+ +SG+T G VGFGVD LG  ++KLDGG GT GT LLPVH    D  P DD
Sbjct: 63  EEWTQSFILNFQSGYTPGPVGFGVDALGLLAVKLDGGGGTYGTGLLPVHGAPGDRHPPDD 122

Query: 126 FGRLGVALKAKVSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSTEINGLSLYGGQ 185
           F R+ VA KAK+S+TE++VGEWM  LPILRSDDGRSLPQTF+GG +TS EINGL+LYGGQ
Sbjct: 123 FARVAVAAKAKLSETEVRVGEWMVALPILRSDDGRSLPQTFQGGMITSREINGLALYGGQ 182

Query: 186 FRANSPRNDASMEDMSMNGRGAFTSDRFNFGGGEYAFNEKRTQVGVWYAELSDIYQQQYF 245
            R NSPR+D SM+DM + G    TSDRFNF GGEY    K T+VG W+A L DIYQQ YF
Sbjct: 183 MRQNSPRDDGSMDDMFLQGFAGVTSDRFNFVGGEYELGAK-TKVGAWHARLEDIYQQNYF 241

Query: 246 NLTHSQPIGD-WTLGANLGYFIGKEDGSALAGDLDNKTAFAMLSAKYGGNTFYVGLQKVG 304
              H+QPIG+   L ANLGYF GKE+GSA  GDLDNKT   +   + GGNTFYVGLQKV 
Sbjct: 242 QFLHTQPIGEGMALTANLGYFTGKEEGSARVGDLDNKTYSGLFGLQVGGNTFYVGLQKVS 301

Query: 305 GDDAWMRVNGTSGGTLANDSYNSSYDNAKEKSWQLRHDFNFAAVGVPGLTLMNRYISGDN 364
           GD+ WMRVNGTSGGTLANDS+NS+YDN  E+SWQLRHD+NF  +GVPGLT+MNRYISGD 
Sbjct: 302 GDNGWMRVNGTSGGTLANDSFNSAYDNRNERSWQLRHDYNFTGMGVPGLTIMNRYISGDR 361

Query: 365 VHTATVDDGKEWGRETELAYTVQSGALKNLNVKWRNASIRRDFSTNEFDENRIFINYPIS 424
           +    VDDGKEWGRE+ELAYTVQSG  KNLNVKWRN+SIRRD+S NEFDENR+  NYP+S
Sbjct: 362 IEAGGVDDGKEWGRESELAYTVQSGPFKNLNVKWRNSSIRRDYSANEFDENRLIFNYPLS 421

Query: 425 LL 426
           +L
Sbjct: 422 VL 423