Pairwise Alignments

Query, 426 a.a., PhaK-like protein from Pseudomonas fluorescens FW300-N2E2

Subject, 424 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  295 bits (754), Expect = 2e-84
 Identities = 173/429 (40%), Positives = 248/429 (57%), Gaps = 24/429 (5%)

Query: 11  PAHPSLISLTLALCA-GSSAVVQADQNSGFVDGAKATLNLRNAYINRNFTNPNVAQGKAE 69
           PA  +L++ ++A  A G+S V  A     F++ +KA + LRN Y+NR+F     AQ KAE
Sbjct: 5   PASRTLLAASIAAVALGASGVASA----AFIEDSKAAVELRNFYMNRDFRQSGAAQSKAE 60

Query: 70  EWTQNFILDAKSGFTQGVVGFGVDVLGTYSLKLDGGRGTAGTQLL--PVHDDGRPADDFG 127
           EW Q FIL  +SG+T+G VGFG+D +G   +KLD      GT +L    +   R  DD+G
Sbjct: 61  EWAQGFILKMESGYTEGPVGFGLDAVGLLGVKLDSSPDRTGTGILQRDRNAPNRAQDDYG 120

Query: 128 RLGVALKAKVSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSTEINGLSLYGGQFR 187
             G+  KAK+S T L VG   PV+P+L  +D R LPQT+RG  + S E++GL+L  G   
Sbjct: 121 SAGLTAKAKLSATTLHVGTLQPVVPVLMRNDSRLLPQTYRGAWLQSKEVSGLTLDLGMLD 180

Query: 188 ANSPRNDASMEDMSM---------NGRGAFTSDRFNFGGGEYAFNEKRTQVGVWYAELSD 238
             + R+ +  E+M++          G G  TSD F F GG Y ++  +     +Y  L  
Sbjct: 181 RVNQRDSSDNEEMTVFNAGRRNITFGSGGSTSDEFLFAGGRYDWS-PQLATSYYYGGLDG 239

Query: 239 IYQQQYFNLTHSQPIGD-WTLGANLGYFIGKEDGSALAGDLDNKTAFAMLSAKYGGNTFY 297
           IY Q  FNL H  P+GD  +   +L +    +DG +   ++DN    A+ + K GG+ F 
Sbjct: 240 IYDQHNFNLVHVLPLGDKQSFKTDLRFVRSTDDGGS---NVDNDAFGALFTYKLGGHGFT 296

Query: 298 VGLQKVGGDDAWMRVNGTSGGTLANDSYNSSYDNAKEKSWQLRHDFNFAAVGVPGLTLMN 357
            G Q + GD  +  V G     L N    + + N  E+SWQ+R+D++FAA+GVPGLTLM 
Sbjct: 297 GGYQHMRGDTGFAYVAG-GDNALINLLQINDFGNEDERSWQVRYDYDFAAMGVPGLTLMT 355

Query: 358 RYISGDNV-HTATVDDGKEWGRETELAYTVQSGALKNLNVKWRNASIRRDFSTNEFDENR 416
           RY+SGDNV   A   +GK W R T++AY +QSG LKNL +K RNA+ R +F  N+ DENR
Sbjct: 356 RYVSGDNVDRGAGASEGKTWERNTDIAYVIQSGPLKNLGLKLRNATTRSNFQ-NDLDENR 414

Query: 417 IFINYPISL 425
           + ++Y + L
Sbjct: 415 VIVSYSLPL 423