Pairwise Alignments

Query, 487 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

Subject, 462 a.a., Multidrug efflux system, outer membrane factor lipoprotein from Pseudomonas sp. S08-1

 Score =  231 bits (589), Expect = 4e-65
 Identities = 156/475 (32%), Positives = 242/475 (50%), Gaps = 18/475 (3%)

Query: 4   LRPLAFLVSASLMTGCAVGPDYQRPNAVLSDRFLGQPSVEQRSGTTQASLTTWWEGFGDP 63
           ++PL   + A  ++ CAVGPDYQ P    +     +     R+    A    WWE F DP
Sbjct: 1   MKPLIPALLALAVSACAVGPDYQAPETQPARITALEAGDYDRTDFESA----WWEQFDDP 56

Query: 64  VLSDFIAKALEQNLDLAQASARVAQARAGLGAANAALLP--SGNISGQAARAYQSVETPQ 121
            LS  + ++L++N +L  A AR+  ARA         +P  +   SG+  +A Q   T +
Sbjct: 57  TLSQLVQQSLKENRELRVAFARLRAARAIRDDVGNDQMPVITSRASGEFGKAQQP-PTSE 115

Query: 122 GQLLNSNPGFDRYGNSYELDLGASWELDVFGGLRRGREAALAEYQASEAGAAATRLAVAA 181
            ++             Y+L L  +WELD+FG ++R  EA+ A+ +A+EA     ++++ A
Sbjct: 116 ERIRQER---------YDLGLDMAWELDLFGRIQRTIEASDAQSEAAEAELYQLQVSLIA 166

Query: 182 QTADIYITLRGLQARLDIANHQVKTQQDLLEKVQLLYSKGLAASYQVRQTEGALAQVQAT 241
           +  D Y  LRG Q R  IA   +K Q       + L   G+ +   V + +  LA  +A+
Sbjct: 167 ELVDAYGNLRGAQLRERIARDNLKNQSQSRALTEQLRDAGIGSELDVLRADARLAATEAS 226

Query: 242 VPVLQTGLDAAMNALDVMLGTPPGTHRPQLTETGSIPLPPQISEMGTPADLLRRRPDLIV 301
           +P LQ     A + +  +LG  P      L++   +P+  +   +G PA+LLRRRPD+ V
Sbjct: 227 LPQLQAEEARARHRIATLLGQRPEQLTVDLSDK-PLPVIAKALPIGDPAELLRRRPDVRV 285

Query: 302 AERRLAASNARIGEAVAEYYPKFSLSALLGSATAVSAGHLFSGGASQASGALGLRWRLFD 361
           AER+LAA+ A +G A A+ +P+ SLS  LG  TA     L +  A     A  + W  FD
Sbjct: 286 AERQLAAATANVGVATADLFPRVSLSGFLGF-TAGRGSQLGAADARAWGVAPTISWAAFD 344

Query: 362 FGRINAQIDQAKGQEAEALAAYRQSALRATEDVENAFSALVNREAQATTLTVGEASLSEA 421
            G + A++  A+     ALA+Y Q  L A E+ ENAFS    R+ +  +L     +   A
Sbjct: 345 LGSVRARLRGAEADADGALASYEQQVLLALEESENAFSDYAKRQQRLVSLARQSEASRAA 404

Query: 422 RRSSFIAYQKGTASLIDVLNADQTLLQASDARAQARTESARAAVAAFRALGGGWQ 476
              + + Y++GT   + +L+A++  L A DA+A A  E  R  VA ++ALGGGWQ
Sbjct: 405 AAQAAVRYREGTEDFLVLLDAERERLAAEDAQALAEIELYRGIVAIYKALGGGWQ 459