Pairwise Alignments

Query, 487 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

Subject, 471 a.a., efflux transporter outer membrane subunit from Pseudomonas sp. BP01

 Score =  226 bits (576), Expect = 1e-63
 Identities = 157/483 (32%), Positives = 236/483 (48%), Gaps = 17/483 (3%)

Query: 4   LRPLAFLVSASLMTGCAVGPDYQRPNAVLSDRFLGQPSVEQRSGTTQASLTTWWEGFGDP 63
           L+PL   + A  +  CAVGPDYQ P    +        V+ ++       + WW+ F DP
Sbjct: 4   LKPLTPSLLALALAACAVGPDYQAPATEPAQL---SSDVQAKAYDRSRFESLWWKQFDDP 60

Query: 64  VLSDFIAKALEQNLDLAQASARVAQARAGLGAANAALLPSGNISGQAARAYQSVETPQGQ 123
           VL+  +  +L+ N DL  A AR+  AR+    A     P       +      +     Q
Sbjct: 61  VLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDQFPVVTSRASSDIGKGQIPGQTTQ 120

Query: 124 LLNSNPGFDRYGNSYELDLGASWELDVFGGLRRGREAALAEYQASEAGAAATRLAVAAQT 183
            +NS          Y+L L  +WELD+FG ++R  EA+ A+   + A     ++++ A+ 
Sbjct: 121 RVNSE--------RYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAEL 172

Query: 184 ADIYITLRGLQARLDIANHQVKTQQDLLEKVQLLYSKGLAASYQVRQTEGALAQVQATVP 243
            D Y  LRG Q R  IA   +KTQQ+     + L   G+     V + +  LA V+ATVP
Sbjct: 173 VDAYGQLRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVP 232

Query: 244 VLQTGLDAAMNALDVMLGTPPGTHRPQLTETGSIPLPPQISEMGTPADLLRRRPDLIVAE 303
            LQ     A + +  +LG  P      L+    +P   +   +G P +LLRRRPD+  AE
Sbjct: 233 QLQAEQARARHRIATLLGQRPDALSVDLSPK-DLPAIAKALPVGDPGELLRRRPDIRSAE 291

Query: 304 RRLAASNARIGEAVAEYYPKFSLSALLGSATAVSAGHLFSGGASQASGALGLRWRLFDFG 363
           R+LAA+ A +G A A+ +P+ SLS  LG  TA     + S  A+  +    + W  FD G
Sbjct: 292 RQLAAATANVGVATADLFPRVSLSGFLGF-TAARGSQIGSSAANAWALGPSITWAAFDLG 350

Query: 364 RINAQIDQAKGQEAEALAAYRQSALRATEDVENAFSALVNREAQATTLTVGEASLSEARR 423
            + A++  AK     ALA Y Q  L A E+  NAFS     + +  +L     +  +A  
Sbjct: 351 SVRARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAE 410

Query: 424 SSFIAYQKGTASLIDVLNADQTLLQASDARAQARTESARAAVAAFRALGGGWQAPQPPQP 483
            + I Y++GT   + +L+A++  L A DA+AQ   +  R  V+ ++ALGGGWQ    PQ 
Sbjct: 411 LASIRYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQ----PQT 466

Query: 484 VAS 486
           VAS
Sbjct: 467 VAS 469