Pairwise Alignments

Query, 487 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

Subject, 487 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Sphingomonas koreensis DSMZ 15582

 Score =  226 bits (575), Expect = 2e-63
 Identities = 163/495 (32%), Positives = 239/495 (48%), Gaps = 21/495 (4%)

Query: 1   MPPLRPLAFLVSASLMTGCAVGPDYQRPNA--VLSDRFLGQPSVEQRSGTTQASLTTWWE 58
           M  L  +A L++ SL+ GCAVGP+Y+RP      +  F+     +   G  +     WW 
Sbjct: 1   MKRLSLIAPLLAGSLLAGCAVGPNYERPETPPAAAGAFVDPGITKVTPGAVEGE---WWR 57

Query: 59  GFGDPVLSDFIAKALEQNLDLAQASARVAQARAGLGAANAALLPSGNISGQAARAYQSVE 118
            F DPVL   + +AL  N D+ QASA + +ARA L  +    LP   + GQ  R     E
Sbjct: 58  LFKDPVLDRLVVEALTHNTDIRQASANLKRARAILSESRGQRLPGTTLQGQYTRQRTGAE 117

Query: 119 TPQGQLLNSNPGFDRYGNSY-ELDLGASWELDVFGGLRRGREAALAEYQASEAGAAATRL 177
           + QG L    PG D   N +  L   AS+E+D+FG + R  EA+  + +A++A     R+
Sbjct: 118 SAQGAL---PPGVDGVENDFFRLGFDASYEVDLFGRVSRSIEASRGDTEAAQAALDGARV 174

Query: 178 AVAAQTADIYITLRGLQARLDIANHQVKTQQDLLEKVQLLYSKGLAASYQVRQTEGALAQ 237
           AVAA+TA  Y    G  A+ ++A   V+ Q    E  Q L   G   +  + Q       
Sbjct: 175 AVAAETARTYAAACGFAAQAEVARETVRLQTRTFELTQRLVEAGRGTARDIDQARVLTEN 234

Query: 238 VQATVPVLQTGLDAAMNALDVMLGTPPGTHRPQLTETGSIPLPPQISEM---GTPADLLR 294
            +A VP  +    AA+ AL  + G PP       ++  +   PP +S++   G    LL 
Sbjct: 235 ARAQVPAFEAERRAALYALATLTGKPPAELD---SDASACATPPGVSDLIPVGDGQALLA 291

Query: 295 RRPDLIVAERRLAASNARIGEAVAEYYPKFSLSALLGSATAVSAGHLFSGGASQASGALG 354
           RRPD+  AER LAA  AR+G A A  YP      LLGS +  S      G +S  + +LG
Sbjct: 292 RRPDVRQAERALAADTARVGVATASLYPSI---RLLGSVSLGSQSLDNLGKSSSFNFSLG 348

Query: 355 --LRWRLFDFGRINAQIDQAKGQEAEALAAYRQSALRATEDVENAFSALVNREAQATTLT 412
             L W   +     AQI QA+     +LAA+  + L A  +VE A +       +   L 
Sbjct: 349 PLLSWNFPNITAARAQIRQAEAGAEGSLAAFDGTVLTALREVEQALARYSGEIERNVALR 408

Query: 413 VGEASLSEARRSSFIAYQKGTASLIDVLNADQTLLQASDARAQARTESARAAVAAFRALG 472
             + + + A R + + ++ G  SL+  ++A++    A  A AQ+    A A VA F+ALG
Sbjct: 409 RADTAATNAARIAILRFEAGRDSLLQRIDAERDRAGARAALAQSNAALAEAQVALFKALG 468

Query: 473 GGWQ-APQPPQPVAS 486
           GGW+ AP P +  AS
Sbjct: 469 GGWEGAPAPVRREAS 483