Pairwise Alignments

Query, 487 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

Subject, 491 a.a., RND transporter from Herbaspirillum seropedicae SmR1

 Score =  261 bits (667), Expect = 4e-74
 Identities = 176/486 (36%), Positives = 237/486 (48%), Gaps = 16/486 (3%)

Query: 3   PLRPLAFLVSASLMTGCAVGPDYQRPNAVLSDRFLGQPSVEQR-SGTTQASLTTWWEGFG 61
           P   L  L +A+L+ GCA+GPDY  P         G   V    S TT A +  WW+G G
Sbjct: 12  PAARLIALAAAALLAGCALGPDYAGPPEAAPQAAHGGQFVRGGDSATTTAPINQWWQGLG 71

Query: 62  DPVLSDFIAKALEQNLDLAQASARVAQARAGLGAANAALLPSGNISGQAARAYQSVETPQ 121
           D  L+  I +AL+ N +L  A AR+ Q+RAGL    A   PS   S  A  A      P 
Sbjct: 72  DAQLTSLIERALQANPNLGIARARLQQSRAGLALEQANAAPSVGASALAGHA----RLPP 127

Query: 122 GQL------LNSNPGFDRYGNSYELDLGASWELDVFGGLRRGREAALAEYQASEAGAAAT 175
             L       +S  G     N Y L   ASWE+D+FGG RR  +AA A   A++A  A  
Sbjct: 128 ANLGALTGGASSGNGSPTSANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQASLADV 187

Query: 176 RLAVAAQTADIYITLRGLQARLDIANHQVKTQQDLLEKVQLLYSKGLAASYQVRQTEGAL 235
           ++++AA+ A+ YI+LR  Q RL +    V+ Q+ +L+       +G A+S    + +  L
Sbjct: 188 QVSLAAEVANAYISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQNQL 247

Query: 236 AQVQATVPVLQTGLDAAMNALDVMLGTPPGTHRPQLTETGSIPLPPQISEMGTPADLLRR 295
              +A +  LQ   DA +N L  +LG  PGT   +L  T  +PLPPQ   +G P  LLRR
Sbjct: 248 DASRADLVPLQADRDAYLNQLATLLGQEPGTLDGELAATVPVPLPPQQVAVGDPVSLLRR 307

Query: 296 RPDLIVAERRLAASNARIGEAVAEYYPKFSLSALLGSATAVSAGHLFSGGASQASGALGL 355
           RPD+  AER LAA  A+IG+A A  YP   L  ++G         L       A GA  L
Sbjct: 308 RPDVRAAERTLAADTAKIGQAEAARYPSLKLFGVIGLG-GTHPSDLTRLDDFAALGAPML 366

Query: 356 RWRLFDFGRINAQIDQAKGQEAEALAAYRQSALRATEDVENAFSALVNREAQATTLTVGE 415
            W   DFGR  A++ QA+    EA   YRQS L A  D E+A S    R  + +  T+  
Sbjct: 367 SWNFLDFGRAKARVTQAERVRDEAEMKYRQSVLEALRDAEDALSRF--RYGRVSVATIAR 424

Query: 416 ASLSEARRSSFI--AYQKGTASLIDVLNADQTLLQASDARAQARTESARAAVAAFRALGG 473
             LS  R  +     YQ GT +LI+VL+  +  + A     QA     R+ V   +ALG 
Sbjct: 425 TKLSADRALALARQRYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALGL 484

Query: 474 GWQAPQ 479
           GW   Q
Sbjct: 485 GWSDEQ 490