Pairwise Alignments

Query, 487 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

Subject, 472 a.a., RND transporter from Burkholderia phytofirmans PsJN

 Score =  239 bits (609), Expect = 2e-67
 Identities = 170/489 (34%), Positives = 243/489 (49%), Gaps = 33/489 (6%)

Query: 2   PPLRPLAFLVSASLMTGCAVGPDYQRPNAVLSDRF-LGQPSVEQRSGTTQASLTTWWEGF 60
           P  R LA  V A    GC VGPDY RP       F    P  E            WW  F
Sbjct: 4   PRCRLLA-AVCACWFAGCTVGPDYHRPAVDTPSSFRYASPDAE----VVDQGAVQWWSQF 58

Query: 61  GDPVLSDFIAKALEQNLDLAQASARVAQARAGLGAANAALLPS--GNISGQAARAYQSVE 118
            DPVL   I +AL+QN DLA A+ARV +    L    A L P    N  G   R+  +  
Sbjct: 59  NDPVLDGLIQRALDQNKDLAIAAARVDEFYGRLMTTRAGLFPQVGANFGGGRGRSVPA-- 116

Query: 119 TPQGQLLNSNPGF-DRYGNSYELDLGASWELDVFGGLRRGREAALAEYQASEAGAAATRL 177
                     PGF    GN  +LD+ ASWE+D+FG LRR  EAA A+Y  ++A   ATR+
Sbjct: 117 ----------PGFAPAVGNQVQLDVMASWEIDLFGRLRRLTEAARADYLGTQAAQQATRI 166

Query: 178 AVAAQTADIYITLRGLQARLDIANHQVKTQQDLLEKVQLLYSKGLAASYQVRQTEGALAQ 237
           A+ +  A  Y+ LR L  RL+IA   + ++ D L   Q  ++ G+ +  QV Q +     
Sbjct: 167 ALISSVATSYLLLRDLDQRLEIAKSTLASRADALSLFQERFTGGVVSQLQVSQAKSEYES 226

Query: 238 VQATVPVLQTGLDAAMNALDVMLGTPPG--THRPQLTETGSIPLPPQISEMGTPADLLRR 295
            QA+V   Q  +    NAL ++LG  PG       LT+  +  +P      G P+ LL R
Sbjct: 227 AQASVYAFQQQIAQQENALSLLLGDNPGPIPRGKPLTQLSAPAIP-----AGLPSSLLER 281

Query: 296 RPDLIVAERRLAASNARIGEAVAEYYPKFSLSALLGSATAVSAGHLFSGGASQASGALGL 355
           RPD++ AE+ L ++NA IG A A+Y+P  SL+ + G+A+   +G L++G A   S A  +
Sbjct: 282 RPDILQAEQALVSANASIGAARAQYFPSISLTGMFGAASTALSG-LWTGPARIWSFAGAI 340

Query: 356 RWRLFDFGRINAQIDQAKGQEAEALAAYRQSALRATEDVENAF--SALVNREAQATTLTV 413
              +F  G I   +  A+ Q+ EAL +Y Q+   A  DVENA    A V  + QAT   V
Sbjct: 341 SQPIFTGGAITGSVRTAEAQQQEALFSYEQAIQSAFADVENALVGVARVRDQLQATNRQV 400

Query: 414 GEASLSEARRSSFIAYQKGTASLIDVLNADQTLLQASDARAQARTESARAAVAAFRALGG 473
              +L++    +   Y+ G  S ++VL+A+++L  A   ++Q + +     VA ++ALG 
Sbjct: 401 --EALAQYASLARDLYEGGYTSYLEVLDAERSLFNAQLQQSQLQDQQLAEIVALYKALGY 458

Query: 474 GWQAPQPPQ 482
           GW      Q
Sbjct: 459 GWNVDSGSQ 467