Pairwise Alignments

Query, 423 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N2E2

Subject, 440 a.a., long-chain fatty acid transport protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  165 bits (417), Expect = 3e-45
 Identities = 121/444 (27%), Positives = 210/444 (47%), Gaps = 36/444 (8%)

Query: 7   KTPMSLAVALATSQVFASGFALNEQSISGMGAGFAGRSSSAEDASTVFGNPAGMSRLKKE 66
           KT +++A+ALA+SQ FASGF LN QS +GMG  FAG +  A++A+ +  NPA M+   K+
Sbjct: 6   KTLLTVAIALASSQTFASGFQLNSQSATGMGRAFAGDAVIADNATVLSRNPAAMALFDKD 65

Query: 67  QVSLGAATLFTQSDISQTRSTF-GGRED----GDMVPTTTVPMGYYVKPVDEHWAVGVGF 121
            +S G        D+         G  D     D   +  +P  +Y+ P+D+ +AVG   
Sbjct: 66  AISFGLTYADITVDVKDVNFNLPNGAVDLGSIDDAGSSKVIPNIFYIHPIDDKFAVGFAA 125

Query: 122 YVPFGLITDYGSDFAGRYYGN--------KSEVTTLTFQPTVSYAFNDKVSIGFGPTINR 173
           +  FG  TD  S       G+        ++EVTT+ F  +VSY  ND  SIG G  ++ 
Sbjct: 126 FSNFGTGTDASSLSKNLPKGSPAPYDLLGETEVTTVNFNASVSYRINDIFSIGAG--VDA 183

Query: 174 ISGEISGMVPNPLSPGSNDGKLKSNGDDTALGFNAGILVQATDQTRLGLTYHSKVSYHLD 233
           I GE   +  N     S    +  + D  A G   G  V+     R G++Y    + +++
Sbjct: 184 IYGE-GRLTRN----ASTTPLVDVDADGWAFGGILGATVELDKDNRFGISYRFSPTVNVE 238

Query: 234 AK-SKLTGGIFSVLGVSGRSYDA----SLDVDTPESVDISLTHQLNDDWTMYLGSTWTRW 288
              + ++    S  G+  ++  A    SLDV   +   ++  HQ+   + ++  + +T+W
Sbjct: 239 GDINTISTKDLSAAGLGSKTALATNFDSLDVPLADIFQVAGFHQITPKFALHYTAQYTQW 298

Query: 289 SRFKELTIENSGLPALLSGTLGT---------VSEEQNWHDTWAHAIGAAYKLNDQWVLR 339
           S+F ++T ++ G+  ++ G  G            +E  W D+W  ++G  Y +N+Q+ +R
Sbjct: 299 SKFDQITAKD-GVATIIPGQAGAGIKLPAGDIALKEYQWKDSWLFSLGGTYTINEQFTVR 357

Query: 340 AGLSVDQSPANNTNRGPRIPTGDRTVLSFGAGWTPVEEVTIDVAYSYLQEESVRINETSS 399
           AG   DQ   +  +     P  DR   + G  +    + T+D   ++++ E V + E S+
Sbjct: 358 AGYMHDQGVVDEIS-SISFPDSDRNWYTAGMSYHINPQNTVDFGIAFIKGEEVHLIENSA 416

Query: 400 TRGAYSSKYRNSASGFGTSVSYRF 423
             G  ++   +S   +    SY+F
Sbjct: 417 ITGPVNAITESSGMYYSVQYSYQF 440