Pairwise Alignments

Query, 473 a.a., Outer membrane protein OprN from Pseudomonas fluorescens FW300-N2E2

Subject, 480 a.a., efflux transporter outer membrane subunit from Pseudomonas fluorescens SBW25

 Score =  239 bits (611), Expect = 1e-67
 Identities = 165/470 (35%), Positives = 253/470 (53%), Gaps = 25/470 (5%)

Query: 11  LVLALSAC-AVGPDYKAPQTEAANITTATDGAAGQ-KNFDRARFEGIWWQQFDDPTLNAL 68
           L + LSAC  VGPDY  P+  A N        AG+  N   A     WW+ + DP L+ L
Sbjct: 10  LGVLLSACQVVGPDYTLPEKSAINRGDLQGQLAGEGHNVVSAPVPADWWKLYKDPRLDEL 69

Query: 69  VTRSLEGNRELRVAFARLRAARAIRDDASNDAMPTITSRASSDLGKGQIPGQT---TDRV 125
           V +++  N +LRVA A L+ AR     A +    ++ ++A +   + Q  G+    +++V
Sbjct: 70  VRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSVGAKAEAQ--RLQESGEAFLLSEKV 127

Query: 126 NTERY-DLGLDMAWELDLFGRIRRNLEATDADQQAVEADLYQLQVTMIAELVDAYGQLRG 184
                  +G+  +++ DLFG ++R +E+  A   A +A     ++T++A++V +Y Q+  
Sbjct: 128 PVGNIGSVGITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITLVADVVRSYTQVCA 187

Query: 185 AQLREKIALANLKNQQDSRKITESLRDAGVGDQLDVVRADARLASVEASVPQLQAEQVRQ 244
           A     IA  +L  Q  S K+T+ LRDAG GD+  V R+  +  S+ A +P+ QA +   
Sbjct: 188 ANEELAIANESLDLQAQSTKLTQRLRDAGRGDETQVTRSQTQYKSLRADMPRYQALRQAG 247

Query: 245 RNRIATLLGERPDKLSVDLSP-KQLPAIAKALPIGDPGELLQRRPDILSAERQLAAATAR 303
             R++ LL +  D+L        +LP IA+ LP+GD   LL+RRPD+  AERQLAAATAR
Sbjct: 248 LFRLSMLLAKPLDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPDVRQAERQLAAATAR 307

Query: 304 IGVAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGAD 363
           IGVA   L+P +S+   +G T G    +G+ A N W  GP I+W     G+ RAR+  A+
Sbjct: 308 IGVATGALYPDISIGATVG-TVGLLDNLGTPATNRWGFGPMISWTVPTNGA-RARIHEAE 365

Query: 364 AEADGALATYEQQVLLALEESENAFSDYGKRQQRLISLIRQSESSRAAADLAEIRYREGT 423
           A   GALA ++  VL A+ E++   + Y  + QR  +L    ES++ AA      ++ G 
Sbjct: 366 AATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAKEAAGQTHRFFQAGR 425

Query: 424 VDFLVLLDAQ------RERLAAEDTQ-AQAEVDLYRGIVAIYKALGGGWK 466
             FL  L A       R +LAA +TQ A +++DL       + ALGGGW+
Sbjct: 426 ASFLADLQATRTYTDVRAQLAAANTQVAMSQIDL-------FLALGGGWE 468