Pairwise Alignments

Query, 473 a.a., Outer membrane protein OprN from Pseudomonas fluorescens FW300-N2E2

Subject, 504 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  233 bits (595), Expect = 9e-66
 Identities = 157/460 (34%), Positives = 239/460 (51%), Gaps = 15/460 (3%)

Query: 15  LSACAVGPDYKAPQTEAANITTATDGAAGQKNFDRARFEGIWWQQFDDPTLNALVTRSLE 74
           LS CA+GPDY+ P  +  +   A    AG    ++      WW  F D TL+AL   +L 
Sbjct: 15  LSGCAIGPDYQRPGMDLPSAWRAESADAGMVAGEK------WWTLFGDATLDALEEEALA 68

Query: 75  GNRELRVAFARLRAARAIRDDASNDAMPTITSRASSDLGKGQIPGQTTDRVNTERYDLGL 134
            N +L  A A + A+RA    A++  +P+IT + SS   +G   GQ       E  DL  
Sbjct: 69  ANGDLATAMANVDASRAQLTVATSYLLPSITGQGSSVRQRGSERGQNPPVEGREVTDLHK 128

Query: 135 DMA---WELDLFGRIRRNLEATDADQQAVEADLYQLQVTMIAELVDAYGQLRGAQLREKI 191
             A   +ELDL+G+ RR  EA  A     EA    +++ +++++  +Y  LR A  +  I
Sbjct: 129 ASALASFELDLWGKYRRAHEAARAGLLGTEAAYATVRLAVVSQVAQSYFGLRAADRQLDI 188

Query: 192 ALANLKNQQDSRKITESLRDAGVGDQLDVVRADARLASVEASVPQLQAEQVRQRNRIATL 251
           A   L ++++S KI E+  ++G+  +LD  +A A  AS  ASV QL+         +++L
Sbjct: 189 ARQTLTSREESLKIREARFNSGLTSELDYRQAQAETASARASVRQLEQAVAAAETALSSL 248

Query: 252 LGERPDKLSVDLSPK-----QLPAIAKALPIGDPGELLQRRPDILSAERQLAAATARIGV 306
           LG  P  + V+ SP+     +  A+   +P G P  LL RRPD+  AE  L  ATA IGV
Sbjct: 249 LGRSPRDI-VERSPERGLDIETFAVPPQIPAGLPAGLLARRPDVARAEADLHYATASIGV 307

Query: 307 AKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGADAEA 366
           AKADL P +SL+G +G+ +   +++ SS++  W+ G S T    D G   A +  ADA+ 
Sbjct: 308 AKADLLPAISLTGLMGYESIDLTRLVSSSSGTWSYGASATMPLLDFGRTLANIDMADAKQ 367

Query: 367 DGALATYEQQVLLALEESENAFSDYGKRQQRLISLIRQSESSRAAADLAEIRYREGTVDF 426
             ALA YEQ V  A  E+++A     K +Q + +   Q  +   +  LA +RY  G   +
Sbjct: 368 RAALAAYEQAVRDAFRETQDALVANRKTRQVVDAQATQVAALERSLTLARLRYENGYSSY 427

Query: 427 LVLLDAQRERLAAEDTQAQAEVDLYRGIVAIYKALGGGWK 466
           L +LDA+R    A+    +A  +    +V + K+LGGGWK
Sbjct: 428 LEVLDAERSLFQAQLNLVEARRNQLDAVVQVCKSLGGGWK 467