Pairwise Alignments

Query, 1213 a.a., Exonuclease SbcC from Pseudomonas fluorescens FW300-N2E2

Subject, 1200 a.a., chromosome segregation protein SMC from Synechocystis sp000284455 PCC 6803

 Score =  125 bits (313), Expect = 3e-32
 Identities = 280/1221 (22%), Positives = 462/1221 (37%), Gaps = 189/1221 (15%)

Query: 6    IRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDAL--CLALFGAVPRLNN 63
            I L +  S  G   I F        G   ++GP G+GKS +LDAL  CL L       + 
Sbjct: 7    IELSHFKSFGGTTAIPFLP------GFTVVSGPNGSGKSNILDALLFCLGL-----ATSK 55

Query: 64   TGRDAKVPDVDGEIATGDPRTLLRRGTGDGYAEVDFRGIDGRRYRARWEANRAREKAGGK 123
              R  ++PD+      G+      RG+ +    V F   DG    +   AN      G K
Sbjct: 56   GMRAERLPDLVNNTFKGN------RGSSEASVSVTFELHDGENL-SEPGANHNGNGNGAK 108

Query: 124  LQASRQSLRDLDNDQLLASQKGEYKTQL----ETALGLNFEQFTRAV--------LLAQS 171
            +       R     +L  ++ G Y +      ETA      +    +        ++ Q 
Sbjct: 109  ISKEWTVTR-----RLKVTKGGNYSSNYYINGETATVTELHEQLNELRIYPEGYNIVLQG 163

Query: 172  EFSAFLKADDNERSELLEKLTDTALYTRLGRRAFDKAKHAKETHKQLQDQATGVTPLAPE 231
            + +  +  +  ER E++++L   A + R       K    KET  ++QD+      +A E
Sbjct: 164  DVTRIITMNSKERREIIDELAGVAEFDR-------KIVKTKETLTEVQDREERCQIIATE 216

Query: 232  ARAELDQRFTEAQLQLKAQQAQLKQLEQQHTWLRDLGLLQDEHASAAEQLQQAQADWNAL 291
                L++   + Q + +  QA  +Q++++  W + +     E        QQ Q  W  L
Sbjct: 217  LERTLERLAADRQ-KAEKYQALRQQVQEKQGWAKVIQYKAVE--------QQRQKLWGQL 267

Query: 292  ADERLKLVRLEQLAPQRHQFIRQTELNRQLEPLTAQIQQL-TQQQIDLHAQQAELEKALD 350
              +R +  +++Q   QR Q I QT+   +LE L AQ++ L  ++Q+ + AQ A  +   D
Sbjct: 268  ERDREQSQQIQQALDQRSQAI-QTQ-QTELEKLNAQVKALGEEEQLAVAAQLATQKAQRD 325

Query: 351  DAQQALASARQQSIDSAPLLRQAFGEQSTLARLAQDANLSAERQEQAQQACTEGQRTIDT 410
              QQ      +Q  +    + Q   E S   +  Q  ++  E+     Q   + +  + T
Sbjct: 326  QLQQRYNDGDRQITNHQQQVGQIQAEISQSQQ--QFLHIQQEKSFHNTQTLPQLEAAVQT 383

Query: 411  LLEQQRQVAERLQRIADALEQ-STHLAPLSDAWNAYRDRL----QQLMLIGNRLNQGQAE 465
              +Q  Q+  + Q IA A E        LS   N  +D L     QL  +  R  Q    
Sbjct: 384  SQQQLEQLRHQAQAIASASEAWVQEQTQLSRTVNQLQDELIPQRSQLAQLEERQQQLLTN 443

Query: 466  LATLEQSATRAAEELATRRQDLEVLYKEAGAEPQAVAEQIQLLGT-LLQDNRKQLRAFED 524
            LA L    T+ + EL    ++ +    +   + +A+  QIQ L + L Q  +++    E 
Sbjct: 444  LAELTPLLTKVSVEL----EEKQFAQGQFNFQGEALTSQIQTLASDLAQLEQERSLLQET 499

Query: 525  LTRLWASQQE----LDKRGAELEQRQQ-------RALQERD-----RLVREGGEAKAELT 568
             TRL   QQE    LDK  A  + +Q+       + + + D      LV + G+ + +  
Sbjct: 500  QTRLLKEQQEKQRQLDKLEAASQAQQEVQGTYATKVILQSDLPGVCGLVAQLGQVEPQYQ 559

Query: 569  IAEQTLTVTR--ELLERQRLARSESVEQLRAQLQDEQPCPVCGSVEHPYHQPEALLENLG 626
            +A +     R   L+       +  +E L+              +  P  Q   L    G
Sbjct: 560  LALEIAAGGRLGFLVVEDDGVAAAGIEILKQAKAGRATFLPLNKIRPPKGQNPNLSYAHG 619

Query: 627  RFDETEEANARKAVDLLNEKVIDLRTQYSGVIAQLKELKQQQEQLASQQQSLAP----SL 682
              D             L   +ID   +Y+ + A +       + L + +  L      +L
Sbjct: 620  YID-------------LAVNLIDGDRRYADIFAFIFGNTIVFDTLVNARNHLGKHRIVTL 666

Query: 683  EAHPLSAQLLAQDSNKRDTWLAQQNSQLHQHISQDEQRQTALLTLQQDAARLAQQLRDAE 742
            E   L A       ++      +  + + +  ++ +Q +  L  +QQ   R  + L +  
Sbjct: 667  EGDLLEASGAMSGGSRNQRSGLRFGTMVSEDTAEVKQLRQRLQDIQQVQGRNEELLLERT 726

Query: 743  TASQQAAQQLSNQQQELARDRQRLDDELSHFSALLPADTLQALRTEPAATFMQLDQQIAQ 802
              S+Q  QQL   +Q+  R+ Q                 L   +TE      +L QQ  Q
Sbjct: 727  VRSRQLTQQLMEMRQQ-QREAQ-----------------LHGEQTE--RDIARLSQQQTQ 766

Query: 803  RLEQLEQQRDELSEQLQRQQTLEKEQDRQQTRLQQLEAVRLQFSALSEQQQACQQQLTQL 862
              +Q   Q+ +L+E    QQ L   Q       QQL + + Q +AL E  Q  QQ  T  
Sbjct: 767  INQQQINQQQKLAE---LQQNLALLQQSLPPLEQQLASAQQQLTAL-ETSQTHQQWQTIQ 822

Query: 863  LGEHTSAEQWQQQLDQRLEQTRDAEATANQQLQQLRNDLVQLAAELKARQEQARSLDLER 922
            +   T   ++Q+QL Q L Q  D         Q+L   + Q   ++   Q Q  +L  E+
Sbjct: 823  IQIRTVEAEYQRQL-QALRQGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQ 881

Query: 923  QALAAGIAQW----RTSHPELDDAALEALLGLDDQHVSQLRQRLLNSEKAIEQARVLLTE 978
            + L   +A+     +T+  +L  A L   LG       Q R RL   E  + Q R    +
Sbjct: 882  EQLKIALAEMNGAIQTTEAQL--AKLSEKLG----STKQERDRL---ETQLNQLR--SQQ 930

Query: 979  REQRLQNHQAQHNGNLLPEQLAEALTELQGQFAASEQRCAELRAEQAEDQRRQNANQALA 1038
            +EQ+ Q  + Q N     ++  E LT+LQ Q  A EQ   +   E    Q R  AN   A
Sbjct: 931  QEQQWQWEKLQTN----QQEYQENLTQLQTQLEALEQDLPDPWPEIPLLQDRDEANLDFA 986

Query: 1039 QQIEQ---------------------AYIEYQ----RWARLDALIGSATGDRFRKLAQAY 1073
              +E+                     A  EY+    R   L   + +  G+R   L +  
Sbjct: 987  NILEELERSIRNGQKRLEAMEPVNMLALQEYEKTEARLGELSEKLQTIAGERTELLLRIE 1046

Query: 1074 NLDLLVHHANAQLRQLVRR------YRLKRGGSML-----------GLLVMDTEMGDELR 1116
            N   L   +       V +        L  G   L           GL ++    G  +R
Sbjct: 1047 NFTTLRRRSFQDAFDAVNKNFQIIFAELSDGDGYLQLDDAEDPFNGGLNLVAHPKGKPVR 1106

Query: 1117 SVHSLSGGETFLVSLALALGL 1137
             + S+SGGE  L +L+    L
Sbjct: 1107 RLSSMSGGEKSLTALSFIFAL 1127