Pairwise Alignments

Query, 1065 a.a., Ribonuclease E (EC 3.1.26.12) from Pseudomonas fluorescens FW300-N2E2

Subject, 920 a.a., ribonuclease, Rne/Rng family from Dechlorosoma suillum PS

 Score =  758 bits (1958), Expect = 0.0
 Identities = 466/957 (48%), Positives = 587/957 (61%), Gaps = 62/957 (6%)

Query: 1   MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDFGSE 60
           ML NATQ EELRVA+VDGQ+L DLDIES A+EQ+K+NIYKG ITRIEPSLEA FV++G E
Sbjct: 4   MLFNATQAEELRVAIVDGQKLIDLDIESAAKEQRKSNIYKGVITRIEPSLEACFVNYGEE 63

Query: 61  RHGFLPLKEISREYFKKAPEGRVNIKDVLSEGQEVIVQVEKEERGNKGAALTTFISLAGR 120
           RHGFLP KE+SR YF+   + R +IK+ L EGQEVIVQVEK+ERGNKGAALTTF+SLAGR
Sbjct: 64  RHGFLPFKEVSRSYFQPGVDNRASIKEALKEGQEVIVQVEKDERGNKGAALTTFVSLAGR 123

Query: 121 YLVLMPNNPRAGGISRRIEGEERNELREALNGLVAPADMGLIVRTAGLGRSSEEMQWDLD 180
           YLVLMPNNPR GG+SRR+EG+ER ELR+ ++ L  P  M LI RTA +GR++EE+QWDL+
Sbjct: 124 YLVLMPNNPRGGGVSRRVEGDERAELRDVMDQLQVPGGMSLIARTAAIGRNAEELQWDLN 183

Query: 181 YLLQLWTAIKEASLDRSAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEALTFIR 240
           YLL+LW AI+ A+  +S PFLIY E +++IRAIRDY + DIGE+LID+ E  ++A +F+ 
Sbjct: 184 YLLKLWEAIEGAATSQSGPFLIYLEGSLVIRAIRDYFQPDIGEILIDTDEIFEQARSFMG 243

Query: 241 QVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVELPSGGSIVIDPTEALVSIDINS 300
            VMP   +++KLY D VPLF+RFQIE QIE+A+ R V LPSGG+IVID TEALVS+D+NS
Sbjct: 244 TVMPANENRVKLYRDDVPLFSRFQIEHQIESAYSRQVNLPSGGAIVIDHTEALVSVDVNS 303

Query: 301 ARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEEKVREC 360
            R+T+G DIEETAL+TN EAA+EIARQLRLRD+GGLIVIDFIDM   KNQR VE ++R+ 
Sbjct: 304 GRSTRGQDIEETALKTNQEAADEIARQLRLRDLGGLIVIDFIDMESQKNQREVENRLRDA 363

Query: 361 LEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGTGIIRDVESLSLAILRL 420
           L  DRARVQ+G+ISRFGL+E+SRQRLRP+L E+S I CPRC GTG IR  ES +L ILR+
Sbjct: 364 LRHDRARVQMGKISRFGLMELSRQRLRPALAETSYIPCPRCTGTGHIRSTESAALHILRI 423

Query: 421 IEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIVILPNDHLETPHFEVQ 480
           +EEEA+KD TA V  QVP+ VA FLLNEKR  I  IELR +  I+++PN HLETP   +Q
Sbjct: 424 LEEEAMKDNTAAVHTQVPVDVATFLLNEKRPDIQAIELRHKVTILLIPNVHLETPAHTIQ 483

Query: 481 RLR-DDSPEAHTNQSSYE-IAAAAAEVEEVQPAAATRTLVRQEAAVKTAPARANAPVPTE 538
           RLR DD       Q SY  +   A EV+++  A +     RQEAA+K       APV  E
Sbjct: 484 RLRHDDLNNEDVQQPSYRMMEMPAEEVKQLANAQSEARQPRQEAAIKHITPEQPAPVVAE 543

Query: 539 VTAPVAAPAAAPEPSLFKGLVKSLVSLF-ATKEEPAAPAVVAKPATTERPARNEERRNGR 597
              P AAP A  E     G++  + S F   K     P   A P    R  R+E +  G 
Sbjct: 544 --KPAAAPVAKSE-----GIIGKIFSWFRGNKTVEPTPEPAATP-RKGRGQRSEGQGRGE 595

Query: 598 QQTRNRNGRRDEERKPREERAPREERAPREPREERQPREAREEAPAVAREERAPRPPREE 657
           Q+ R R  +R   R    E     ER  R  R E Q   ARE+ P   R +R  R  R  
Sbjct: 596 QRGRGRGEQRGRGRGEGAEGRNGGERGERPTRGETQGDNAREQQPREGRRQRGDRGDRNG 655

Query: 658 RQPRAPREDRKPRGEREERVRELREPLDAAPAAAATAEERPARQPREERAPRPPREERQP 717
            +  A + D + RGE++   R                +ER  RQPR ER         + 
Sbjct: 656 ERNNAVQADNE-RGEQQNEQR----------------KERRERQPRRER-------NSED 691

Query: 718 RAEQAAAAASEEEVLNTEEQLQEDGQDTAEGDRPRRRSRGQRRRSNRRERQRDANGNVIE 777
           +A+QA AA  + + LNT+       Q   +GD    R R + RR+NRR+R      N  E
Sbjct: 692 KAQQAVAA--QADALNTQAAGTAPEQAAPQGDEEGGRGR-RGRRNNRRDRGERRQENGAE 748

Query: 778 GSEESESTENTEAPSAADLAAGLAVTA----AVASSAISAPAEAQA-HEQAERATAAVES 832
           G  +  +        A  +AA +   A     VA +A+ A A   A  E A     AVE 
Sbjct: 749 GEVQQNAVTEVSQEQAPVIAAAVVEVANPVEPVAVAAVEAVAPTVAVVESAAEVAPAVEE 808

Query: 833 APVAEAPVVEAPVVEATTPV---EVTASPEVEVAPAHEAQVAETEVVAEPAPVVEQPVVA 889
           AP A    VEA + EA   V   EV A  E +V P     V   E +A P   ++  V  
Sbjct: 809 APAA---AVEAAIPEAAPVVAVEEVVAPVEEQVIPTPPRAV---EPIAVPPAEIKPVVAN 862

Query: 890 AEPAVETPA---EEKAPEPAREEQTAFNWTAEP----AAPAPVVEPEPTPEPVKAVE 939
            + A+E       E + + AR+ Q A      P      PAPVV  +   EP+  VE
Sbjct: 863 IDQALEASGLVMVETSADKARQVQAAVVENEVPRPRRTRPAPVVISD---EPLVLVE 916