Pairwise Alignments

Query, 617 a.a., ABC transporter, periplasmic substrate-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 622 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  583 bits (1502), Expect = e-171
 Identities = 283/589 (48%), Positives = 399/589 (67%), Gaps = 6/589 (1%)

Query: 8   LLQASSLLFTGLAC--AAPQHAVTLYNEPPKYPANFKHFDYVNPDAPKGGIFRQGG--FG 63
           LL  + +L TG A   AAPQHA+T+Y EP KY   F HF Y NP APKGG  R+     G
Sbjct: 8   LLLIAVVLLTGAAGVDAAPQHALTVYGEPAKYAEGFGHFAYANPQAPKGGTMRRSAVEIG 67

Query: 64  GFDSLNPFISKGVPADDI-GLIYDTLAKQGLDEPFTEYGLIAEKIEKAPDNGWVRFYLRP 122
            FD + P+I KG+    I G++Y  LA++ LDEP+T YGL+A+K+E+A D   +RFYL P
Sbjct: 68  HFDHILPYIDKGIGVSQIDGMLYSPLAQRSLDEPYTVYGLVAQKMERADDGLSLRFYLNP 127

Query: 123 EARFNDGHPVRAEDVVFSFQTLTKDGAPMFRGYYNDVADVIAEDPLKVLFKFKHTNNREL 182
           +ARF DG P+ A+DV +SF+ L   G+  +R  +  V DV+ ED   V F FK+  +R L
Sbjct: 128 KARFADGKPITAQDVRYSFELLMTQGSLRYRTQFAAVKDVVVEDERTVRFNFKNNESRTL 187

Query: 183 PLILGQLPVLPKHWWAERDFSKGN-LEIPLGSGPYKVAEVKAGRSIRYERVKDYWGKDLP 241
           PL +  LPV P+HWW  RDF+ G   E PLGSGPY+V++V +GRSI +ER  D+WGKDLP
Sbjct: 188 PLDIATLPVFPEHWWKTRDFANGGGYEAPLGSGPYRVSKVDSGRSITFERNADWWGKDLP 247

Query: 242 VNRGFYNFDVLATDYYRDNTVAVEALKAGQFDFWLEMTAKNWANAYNIPAVTEGRLIKEQ 301
           V+RG YNFD  + +Y+ D  VA + L+ G +D+  E +A  ++  Y+ PA+ +GRL K  
Sbjct: 248 VSRGLYNFDHFSIEYFGDTDVARQVLRGGAYDYNREFSATGYSIGYDGPALQDGRLQKAH 307

Query: 302 IPNGNPTGMQGFVYNLRRPIFQDVRVRKALSLLLDFEWTNKQLFNGAYARTRSYFENSEM 361
           +    P   QGFV+NL++P FQD RVR+AL++L DFEW+N+Q+    Y R +SYF N+++
Sbjct: 308 LAKEAPQSAQGFVFNLQKPQFQDRRVRQALAMLWDFEWSNRQMMRNVYVRQQSYFSNTDL 367

Query: 362 AATGLPGEDELKILEPLRGKIPEQVFTDAFQPSMCDGSGMIRDQQRKAYQLLQEAGWRIV 421
           AA  LP   EL ILEPLRG+IP++VFT  FQ    DGSG+IRD+Q +A  LL++AGW+  
Sbjct: 368 AARKLPDAGELAILEPLRGQIPDEVFTQVFQAPKTDGSGVIRDKQLQALALLEQAGWKPD 427

Query: 422 DDKMVDAQGKPVVLEFLLAQTEFERILLPFKRNLSDLGIELIIRRVDVSQFVNRVRSRDF 481
            D++V+A+G+P+   FL +Q   +R+LLP+KR L+ +GI++ IRR+D SQ+VNR+ SRD+
Sbjct: 428 GDRLVNAEGEPLSFTFLNSQNGIDRLLLPYKRTLAQIGIDMSIRRIDASQYVNRLMSRDY 487

Query: 482 DLVVGSFPQSSSPGNEQREFWMSAAADKPGSRNTMGLKDPAVDQLVEQLINADSRKSLVA 541
           D+++  +P S+SPG E   ++ SAAA+ PG+ N M LK+PAVD L++ L+ A ++  ++ 
Sbjct: 488 DMIITGYPVSTSPGMELYNYFGSAAANDPGANNYMALKNPAVDALIDGLVKASTQADMLR 547

Query: 542 HARALDRVLQWGYYVIPNWHIKTWRVAYWNHIGHPKITPTYDIGTTTWW 590
           HA ALDRVLQW YY IPN++       +WN  G PK+  + D    +WW
Sbjct: 548 HAHALDRVLQWNYYWIPNYYPPGSSTVWWNRFGMPKVQASNDEAIESWW 596