Pairwise Alignments

Query, 617 a.a., ABC transporter, periplasmic substrate-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 609 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  498 bits (1282), Expect = e-145
 Identities = 257/600 (42%), Positives = 363/600 (60%), Gaps = 16/600 (2%)

Query: 7   LLLQASSLLFTGLACAAPQHAVTLYNEPPKYPANFKHFDYVNPDAPKGGIFRQGGFGGFD 66
           LLL   +L F  LA  +  H    +    KYPA+F HFD+VNP APKGG  +    G FD
Sbjct: 6   LLLTCLALSFPALATISESHGYAQFGTL-KYPASFTHFDWVNPRAPKGGRIKLMASGTFD 64

Query: 67  SLNPFISKGV-PADDIGLIYDTLAK--------QGL-----DEPFTEYGLIAEKIEKAPD 112
           +LNP+  KG  P+   G +   +++         G+     DEP + YGLIAE +E + +
Sbjct: 65  TLNPYTFKGTSPSATPGFLQYGISELNEPLMVGTGIYDPSGDEPASSYGLIAESVEYSDN 124

Query: 113 NGWVRFYLRPEARFNDGHPVRAEDVVFSFQTLTKDGAPMFRGYYNDVADVIAEDPLKVLF 172
           N WV F LR +ARF+DG P+ A DV FS++ L KDG P +R     V  V   +  ++ F
Sbjct: 125 NSWVVFNLRKQARFHDGKPITAYDVAFSYRLLVKDGHPQYRTNLQGVKRVDILNRHRIRF 184

Query: 173 KFKHTNNRELPLILGQLPVLPKHWWAERDFSKGNLEIPLGSGPYKVAEVKAGRSIRYERV 232
            F+  +N  L + LG+LPVLP+H+W  RDF     E PLGSGPY++  V+ GR + +ERV
Sbjct: 185 VFEQPDNPLLVMRLGELPVLPQHYWKNRDFKATTFEPPLGSGPYRITHVQPGRQVVFERV 244

Query: 233 KDYWGKDLPVNRGFYNFDVLATDYYRDNTVAVEALKAGQFDFWLEMTAKNWANAYNIPAV 292
           +++WG  LPVN+G YNF+ +  ++YRD+ VA EA K  +FDF++E  AKNWAN Y  PA+
Sbjct: 245 RNWWGAKLPVNQGKYNFNRVDVEFYRDSVVAFEAFKVAEFDFYIEHQAKNWANGYEFPAM 304

Query: 293 TEGRLIKEQIPNGNPTGMQGFVYNLRRPIFQDVRVRKALSLLLDFEWTNKQLFNGAYART 352
             G +I+ +IP+  PT  Q    N RR  F D RVR+AL L+ DFEWTN+ LF GAY R+
Sbjct: 305 LRGDIIRAEIPHQIPTQTQALFMNSRRATFADQRVREALGLMFDFEWTNRALFYGAYRRS 364

Query: 353 RSYFENSEMAATGLPGEDELKILEPLRGKIPEQVFTDAFQPSMCDGSGMIRDQQRKAYQL 412
            SY+ NS+  ATG P   E  +L P R ++P ++FT+ F+    DG G+ R+  R+A  L
Sbjct: 365 ESYYPNSDFTATGKPEGGEWLLLSPYRKQLPAKLFTEPFELPRTDGRGIPRETLRRALGL 424

Query: 413 LQEAGWRIVDDKMVDAQGKPVVLEFLLAQTEFERILLPFKRNLSDLGIELIIRRVDVSQF 472
           L EAGW+  D  +++  G+P+  E LL     ER+L P+  NL+ +GI+  +R VD +Q+
Sbjct: 425 LAEAGWKASDAGLLNGAGQPLRFEILLVNPRLERVLQPYVENLARIGIQANLRTVDSAQY 484

Query: 473 VNRVRSRDFDLVVGSFPQSSSPGNEQREFWMSAAADKPGSRNTMGLKDPAVDQLVEQLIN 532
             R+   D+D+++ +  QS SPG EQ  ++ S+  D  G RN  G+ +P +D L+ +L+ 
Sbjct: 485 KQRLDHYDYDMILMTLVQSLSPGIEQHLYFHSSQVDVKGGRNYAGVANPIIDDLIAKLLA 544

Query: 533 ADSRKSLVAHARALDRVLQWGYYVIPNWHIKTWRVAYWNHIGHPKITPTYDIGTTTWWVK 592
           A +R   VA ARA+DRVL W +Y IPNW I   R+AY N   H   TP Y +G   WW+K
Sbjct: 545 AQTRDEQVAAARAIDRVLLWNHYTIPNWFISNHRLAYRNRFAH-VTTPPYTLGLRAWWLK 603