Pairwise Alignments

Query, 424 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N2E2

Subject, 484 a.a., outer membrane protein transport protein from Pseudomonas fluorescens SBW25

 Score =  179 bits (453), Expect = 2e-49
 Identities = 136/492 (27%), Positives = 225/492 (45%), Gaps = 80/492 (16%)

Query: 2   KKIMLKTTLGLAVT---LASTQLFASGFALNEQSISGMGTGFAGRSSIADDASTVFGNPA 58
           KK  L+  LGLA+      +  + A GF+       G G  FAG S   +D S+ F NPA
Sbjct: 4   KKRQLQVFLGLALMGGLTTAVPVQAGGFSTPTYGAPGWGRAFAGGSLFKNDPSSAFNNPA 63

Query: 59  GMSRLKRQ--QVTGGFAAID---------------ASTDIN-----DASGTQSGTNKGDM 96
            M+ + R   Q T  +A +                +ST +      D S T +  N+G  
Sbjct: 64  AMAFVDRSIAQFTVDYARVKIQYKGAAFDYAGNPISSTPLGGDGFPDGSATTANNNEGGQ 123

Query: 97  VPLTG-VPMGYYVKPIDDQWAFGLGVYAPFGLITDYENGFQGRSFGSKSEVKVVTFQPTV 155
              T  +P G+ V P+ D++AFGL    P G+ + ++   + R F   ++++ V    ++
Sbjct: 124 GGFTAWLPTGFMVMPLGDRFAFGLSQVVPQGMRSTWDEDSKLRGFAVDTKIETVGLTGSL 183

Query: 156 SYAFNDKVSIGFGPTINRISGSL-------------ESQLGVPGLPE----AGVEIKGDD 198
           S+  ND+ ++G G  I    G +             +S+LG    P     A + IK D+
Sbjct: 184 SFKLNDQFALGGGVIIQHSKGFVSQNVDLLSAAAVSDSELGGTPFPSDVGGALMRIKVDN 243

Query: 199 IGYGYNVGVLVQATDTTRVGLTYHSKVKYKLEGH-------------TEVNP-------- 237
           I  G+  GV+ + T+   +GL YH+++K K+ G              T+ +P        
Sbjct: 244 ISAGWFTGVVWKPTEKDTLGLNYHARIKNKMTGKYSIRADQFSYNLLTQPSPFGGSGTLV 303

Query: 238 GAGMPAFLLTDGRYDASLDITTPESVDFSVTQQINDAWTVYAGSTWTRWSRLKEITVENE 297
           G   P   L      AS  +  P S       + ND +T+ A   WT+WS  +++T+++ 
Sbjct: 304 GTAYPGLELFPDGAHASTQLDIPASAGVDWAHRFNDRFTLGASVVWTQWSSFEDLTLKSG 363

Query: 298 GTSSGGGLLNPSLGTITEEQNWHDTWAYAIGTSYQLNKQWVLRTGLSFDQAPTNNADRSP 357
                       +  ++   ++ +TW Y++G  ++   +  LR G++ DQ PT N+ R P
Sbjct: 364 -----------DMTIVSIPYHYKNTWMYSVGGDWRATDELTLRAGVAIDQTPTRNSTRDP 412

Query: 358 RIPTGDRTIFSLGAGW--SPTDDLTIDVAYS--YLKEEKVKVSGSNALN-QSYNAEYENS 412
           RIP GDRT  SLGAG+     + LT+D AYS  +++E K+K    + L   S + +  +S
Sbjct: 413 RIPDGDRTFLSLGAGYEVKAINGLTLDAAYSHQFVQEVKLKTKNVDRLGAASLDGKAASS 472

Query: 413 ANGFGVGATYRF 424
            +   + ATY F
Sbjct: 473 GDVVSLSATYAF 484