Pairwise Alignments

Query, 424 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N2E2

Subject, 427 a.a., outer membrane protein P1, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  161 bits (407), Expect = 4e-44
 Identities = 121/444 (27%), Positives = 204/444 (45%), Gaps = 39/444 (8%)

Query: 1   MKKIM-LKTTLGLAVTLASTQLFASGFALNEQSISG--MGTGFAGRSSIADDASTVFGNP 57
           MK++  L    GL +   +    A GFAL E    G  +G    GR   ADD S V  NP
Sbjct: 1   MKRLCTLLLAAGLLLAAFTGSASAEGFALYEWGARGNALGGSMVGR---ADDPSAVAFNP 57

Query: 58  AGMSRLKRQQVTGGFAAIDASTDINDASGTQSGTNKGDM---VPLTGVPMGYYVKPIDDQ 114
           AG+++L+   V GGF+AI  S+ +    G +S   +G     VP    P GY    + D 
Sbjct: 58  AGITQLEGTHVMGGFSAIIPSSTVEINHGARSYEGEGAFNIWVP----PHGYMTTQLSDN 113

Query: 115 WAFGLGVYAPFGLITDYENGFQGRSFGSKSE-VKVVTFQPTVSYAFNDKVSIGFGPTINR 173
              G+G+Y  FGL ++Y++   G  +   +  ++ V+F P +++   D +S   G  +  
Sbjct: 114 MWLGMGIYTRFGLGSEYDDSSWGGRYNIYNVGIQTVSFNPNLAFKLTDDLSAAIGVEVMG 173

Query: 174 ISGSLESQLG-------VPGLPEAG---VEIKGDDIGYGYNVGVLVQATDTTRVGLTYHS 223
           +   ++ ++         PG   AG    +++ D  G G   G+  +  D    G++Y S
Sbjct: 174 LKLDMKKKINPTGKANNAPGNNPAGDIDSDLEADSYGVGLTAGLHYRLNDQWAAGVSYKS 233

Query: 224 KVKYKLEGHTEVNPGAGMPAFLLTDGRYDASLD--ITTPESVDFSVTQQINDAWTVYAGS 281
           +VK+K  G    N  + +PA  L     D  ++  +  P+ + F V       W++ AG+
Sbjct: 234 QVKHKARG---TNDFSNVPAGPLQGVYADCDVNGVVILPDMISFGVVYYPTPEWSIEAGA 290

Query: 282 TWTRWSRLKEITVENEGTS-SGGGLLNPSLGTITEEQNWHDTWAYAIGTSYQLNKQWVLR 340
           T TRWS    + + +     +G G +      +  E+ W+D W Y +G  Y+      LR
Sbjct: 291 TLTRWSLYDNLPIYHSAPFYNGAGAM------VNSEKEWNDAWRYNVGVEYKATDWMDLR 344

Query: 341 TGLSFDQAPTNNADRSPRIPTGDRTIFSLGAGWSPTDDLTIDVAYSYLKEEKVKVS--GS 398
            G  +D +P ++      IPT DR ++S G G+   D  T+D++Y+Y+   +V+ S   S
Sbjct: 345 VGYVYDVSPVDDDHVDYLIPTQDRQLYSTGVGFH-WDSYTVDLSYTYIVASEVEYSQRTS 403

Query: 399 NALNQSYNAEYENSANGFGVGATY 422
             + +  +        G  VG T+
Sbjct: 404 EGIFEGNSKGGRTHVLGLSVGYTF 427