Pairwise Alignments

Query, 345 a.a., DNA polymerase III delta subunit (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

Subject, 347 a.a., DNA polymerase III subunit delta from Methylophilus sp. DMC18

 Score =  208 bits (530), Expect = 1e-58
 Identities = 126/331 (38%), Positives = 188/331 (56%), Gaps = 5/331 (1%)

Query: 1   MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADASFDW 60
           M++  AQL ++L      +++++GD+PL   EA D IR+AARQ G  ER  F  +  F+W
Sbjct: 1   MRIQAAQLTQYLPPK-QHLFVLAGDEPLSITEAIDQIRAAARQHGAQERASFTVERYFNW 59

Query: 61  GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA 120
             + Q   S SLFAE+R+LE+ LP+GKPG +GA AL +   +PA DT ++++LP  D   
Sbjct: 60  AQVSQFLQSFSLFAEQRILEINLPTGKPGVEGAKALQQLAEQPAADTTIILTLPAPDRDM 119

Query: 121 QKTKWGKALVEGPQTQFVQIWPVDVSQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL 180
             + W +AL +      + +  V ++QLP WI QRL+    +A + +   IA +VEGNLL
Sbjct: 120 TSSAWYEALSQ--HGVLLVLNQVPLAQLPEWIAQRLAMQQQTADEASRRFIAEQVEGNLL 177

Query: 181 AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE 240
           AA QEI+KL L+   G ++ + ++  V + ARFDV  L +A+L G+    +RMLEGLR E
Sbjct: 178 AAHQEIQKLGLLYPPGPLSEDAIRQCVLNVARFDVSQLGEAMLQGDPQRVMRMLEGLREE 237

Query: 241 GVEPPVILWALARELRLLANLSLQYSQGVPLDKAFSQARPPVWDKRKPLMSKALQRYSAS 300
           G     ++  L    R L  + L   QG+ +  A SQAR  ++  R+ L+ +AL+     
Sbjct: 238 GETAVAVMNPLIWLFRPLLQVRLAMQQGIAMQAALSQAR--LFGDRQQLVRRALEFLPQK 295

Query: 301 RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRL 331
                L +   ID   KG   G  W+ LSRL
Sbjct: 296 HIEAALQKLSDIDRMAKGVGDGDAWLELSRL 326