Pairwise Alignments

Query, 428 a.a., Outer membrane porin, OprD family from Pseudomonas fluorescens FW300-N2E2

Subject, 430 a.a., Porin D from Pseudomonas lactucae CFBP13502

 Score =  632 bits (1631), Expect = 0.0
 Identities = 321/433 (74%), Positives = 358/433 (82%), Gaps = 8/433 (1%)

Query: 1   MLNKRISMIALGILSTTHAMANDQAESKGFVEDSSLKVLLRNAYINRDYKDGNQDKAEWG 60
           ML +R+S+IALGILS + AMANDQ +SKGFVEDS L +  RNAYI+RDYK+G QDKAEWG
Sbjct: 1   MLKQRMSLIALGILSASTAMANDQEQSKGFVEDSHLNIAARNAYISRDYKNGKQDKAEWG 60

Query: 61  QAAIGTFSSGFTQGTVGVGVDAFGLYALRLDGGKGRSGAGGIDFFKQGDSGNAADDLSKF 120
           Q  IG F SGFTQGTVGVGVD  G YA+RLDGGKGRSGAGGIDFFKQGDSG AADDL+K 
Sbjct: 61  QGFIGKFESGFTQGTVGVGVDVIGQYAIRLDGGKGRSGAGGIDFFKQGDSGAAADDLTKG 120

Query: 121 GAAVKFRVSNTVLAYGDQMPALPVLSYDNSRLLPESYTGTLITSKEIKGLELNAGRFTAE 180
           GAAVKFRVSNTVL YGDQMPA+PVL YDNSRLL E+YTGT I SKEI+GL+L+AGRFT E
Sbjct: 121 GAAVKFRVSNTVLKYGDQMPAVPVLQYDNSRLLSETYTGTSIVSKEIEGLQLDAGRFTKE 180

Query: 181 SRKSAEGRDSGGLKSINVLGGSYQFTEQFKASLYASDVEDVLKKQYVNANYVFPLAKDQS 240
           +RKSAEG DSG LK+I+ LGGSY+FTE   A+LYASD+EDVLKKQYVN NYV  L + QS
Sbjct: 181 ARKSAEGTDSGNLKNISYLGGSYKFTESLSAALYASDMEDVLKKQYVNVNYVLALPEKQS 240

Query: 241 LTLDFNGYRTKLDNSYVRE-NNVTGDDNKIWSLAATFATGPHSFTLAHQRSTGDSNLGYA 299
           LT DFNGY+TKLD S+  +  +    DNKIWSL AT+A G HSFTLAHQRSTGD+  GY 
Sbjct: 241 LTFDFNGYKTKLDKSFAEQRGDADARDNKIWSLGATWAVGAHSFTLAHQRSTGDT--GYL 298

Query: 300 YGGYQREQNR---VGDGGNTIYLANSYWSDFNAEDERSWQLGYGLDFTTFGVPGLTYNVA 356
           YGGY R+  R   +GDGGNTI LANSYWSDFN +DERSWQ GYG+DF TFGVPGLTYNVA
Sbjct: 299 YGGY-RDNTRDTGIGDGGNTILLANSYWSDFNGKDERSWQAGYGIDFATFGVPGLTYNVA 357

Query: 357 YVRGDNITTSTSEG-GTEREIFNQFKYVVQSGPAKDLSVRLRSSVLRVSQKSSEYNVSGN 415
           YVRG NI   T  G GTEREI+NQFKYVVQSGPAKDLS+R R+S LRVS  +S YNV GN
Sbjct: 358 YVRGTNIDDGTGRGDGTEREIWNQFKYVVQSGPAKDLSLRARASWLRVSNNASNYNVGGN 417

Query: 416 ELRVFVDYPINVF 428
           ELR+F DYPINVF
Sbjct: 418 ELRLFADYPINVF 430