Pairwise Alignments

Query, 315 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 283 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  119 bits (297), Expect = 1e-31
 Identities = 81/288 (28%), Positives = 146/288 (50%), Gaps = 11/288 (3%)

Query: 11  LNWDDLKFFLEVARTRKASTAAKRLAVDYTTVSRRISSLEASLGTLLFEKSRTNGFVLTA 70
           L WDD+++FL ++R    S +A+ L V+++TV+R + +LE +L   LF++    G+VLT 
Sbjct: 1   LQWDDVRYFLTLSREGSLSASARVLKVEHSTVARHVGNLEKTLRVKLFDR-LARGWVLTT 59

Query: 71  EGQRLLGYAESIESTLHMACEQVSGSGVALSGHVRMGCTEGFGSFFITPQLSHFVDAYPA 130
           EG  L   AE +E  +H +  + + +   LSG VR+       S F+ P+L  F + YP 
Sbjct: 60  EGAELSKQAEQLEVEMH-SLWRAALANTTLSGKVRVSAPPILMSDFLVPRLPAFQEKYPD 118

Query: 131 ISVDILPLPHFISLSKREADIVIALERPEHGPYVCCKLCDYRLQLYATQSYLDNHPPIQR 190
           I ++++     + L++ EADI + +  P     V   LC+    +Y   ++L      +R
Sbjct: 119 IELEVIGEARGVDLTRGEADIALRMGEPVSPLLVARMLCNVSYSVYGIPAWL------ER 172

Query: 191 PADLGKHSFISYVDDLAFSSELLYLANVLPGANAHLRSTSVIAQFVAAQQGRSLAILPCF 250
           P    + SFI  +D  +   +  +L + +      LR+  + A   AA  G  LA+LP F
Sbjct: 173 PE--SERSFIG-LDQESPCRQKAWLESQVDQRRYALRTNDIRAMCHAAMSGIGLALLPRF 229

Query: 251 LAAQDPRLLPVLPEDITVTRQFWMYCREDLRKLKRITLLWDYIREVTE 298
           + A+D RL+ +   +       ++    D+R+  RI    D++ ++ +
Sbjct: 230 MVAEDTRLVAIPMPETPPPCPLYLVMHSDVRRAPRIRATADFLIDLIQ 277