Pairwise Alignments

Query, 322 a.a., Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

Subject, 337 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain from Enterobacter asburiae PDN3

 Score =  303 bits (776), Expect = 4e-87
 Identities = 161/322 (50%), Positives = 214/322 (66%), Gaps = 3/322 (0%)

Query: 3   LLEIKNLNVRFGDATAVPVVDGLDLTVEKGEVLAIVGESGSGKSVTMMALMGLIEHPGIV 62
           +L ++NLNV F   + V V+DG+ LTV  GE LA+VGESG GKS+T +ALMGL+     +
Sbjct: 12  VLRVQNLNVTFA-GSPVSVLDGISLTVRAGETLALVGESGCGKSITSLALMGLLPASAQI 70

Query: 63  TADALNFDGKNMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHLKMS 122
            +  + F   ++ KLS R+   + G +LAM+FQ+PMT+LNP++T+G Q+ E +  H  +S
Sbjct: 71  VSGEMQFRRHDLRKLSPREYADLRGSELAMIFQEPMTSLNPAFTLGDQLSEAVMRHQSVS 130

Query: 123 GKAARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTTA 182
              A K A+++LEKV+IP A  R+ AYPHQLSGGM QRV IAMA+   PKLLIADEPTTA
Sbjct: 131 RAEAMKVALQILEKVQIPAAEMRLKAYPHQLSGGMRQRVMIAMALINHPKLLIADEPTTA 190

Query: 183 LDVTIQAQIMDLLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGKVPELFD 242
           LDVTIQAQI+ LL AL++E    +++ITHDL VVAE AQ+V VMYAGQ VE G V  +F 
Sbjct: 191 LDVTIQAQILALLNALKEETGTAVLMITHDLGVVAEVAQQVAVMYAGQVVEQGSVEAIFA 250

Query: 243 IPAHPYSEALLAAIPEHSMGAARLATLPGIVPGRYDRPQGCLLSPRCPYVQDNCRVQRPA 302
            P HPY+  L+ +IP       +L+T+PG VP     P+GC  + RCP+ Q  C  ++P 
Sbjct: 251 DPQHPYTIGLMGSIPSLGARKGQLSTIPGSVPLPESMPKGCRFATRCPFAQSRCHDEKPQ 310

Query: 303 LDPKTAS-LARCF-YPLNQEVA 322
           L    A     CF  PL Q +A
Sbjct: 311 LTTLGAGHQVACFRVPLEQHIA 332