Pairwise Alignments

Query, 333 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Pseudomonas fluorescens FW300-N2E2

Subject, 274 a.a., diaminopimelate epimerase from Escherichia coli ECRC101

 Score = 51.2 bits (121), Expect = 3e-11
 Identities = 62/247 (25%), Positives = 95/247 (38%), Gaps = 53/247 (21%)

Query: 73  PFQNEPPFDLLIVNTDGTLAERSGNGLTIFSQALQEQGLM--------AGTGDCLLQVHH 124
           P+  E  F   I N DG+   + GNG   F++ ++ +GL            G  +L V  
Sbjct: 51  PYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD 110

Query: 125 DKPDGLSPLQTSVRAAEFEGAQGFWLDLGKPLFGPGAVGAQDVVRVMFNQCDVSRVAALE 184
           D           VR           +++G+P F P AV  +       N+ + + +    
Sbjct: 111 DD---------LVR-----------VNMGEPNFEPSAVPFRA------NKAEKTYIMRAA 144

Query: 185 RLNPAWGNSQFVNIGNPHCVTLVDSAEALPSNPQMRAPALCQSLTRIAYAPPGGAGMPCP 244
                 G    V++GNPHCV  VD  +   +  +   P L +S  R             P
Sbjct: 145 EQTILCG---VVSMGNPHCVIQVDDVDT--AAVETLGPVL-ESHERF------------P 186

Query: 245 MGVNLQWAWLEAEGRIAARVFERGEGPTASSGTSASAVACAAWRAGWVQAGPVSVMMPGG 304
              N+ +  +     I  RV+ERG G T + G+ A A      + G + A  V V +PGG
Sbjct: 187 ERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG-LLAEEVRVELPGG 245

Query: 305 LRRFCWK 311
                WK
Sbjct: 246 RLDIAWK 252