Pairwise Alignments

Query, 333 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Pseudomonas fluorescens FW300-N2E2

Subject, 282 a.a., Diaminopimelate epimerase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 17/138 (12%)

Query: 176 DVSRVAALERLN-PAWGNSQFVNIGNPHCVTLVDSAEALPSNPQMRAPALCQSLTRIAYA 234
           +V    A++ L  P  G      +GNPHC   V  AEA+P +                + 
Sbjct: 134 EVPLAEAMDTLELPIEGTPTATGMGNPHCTFFVADAEAIPLD---------------TFG 178

Query: 235 PPGGAGMPCPMGVNLQWAWLEAEGRIAARVFERGEGPTASSGTSASAVACAAWRAGWVQA 294
           P        P   N+Q A +     I  RV+ERG G T +SG+S+ A   AA R G +  
Sbjct: 179 PRYEHHPLYPQRTNVQVAQIVGPDHIRMRVWERGVGVTLASGSSSCATGVAAARRG-LTG 237

Query: 295 GPVSVMMPGGLRRFCWKK 312
               + + GG     W++
Sbjct: 238 RKTRIDLDGGTLWIDWRE 255