Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

Subject, 608 a.a., ATP-dependent DNA helicase RecQ from Methylophilus sp. DMC18

 Score =  711 bits (1836), Expect = 0.0
 Identities = 355/598 (59%), Positives = 450/598 (75%), Gaps = 8/598 (1%)

Query: 6   QRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSP 65
           Q++L+D+FGY+ FR +Q AI+E V SG DALVLMPTGGGKSLC+Q+PAL R+GLA+VVSP
Sbjct: 7   QQILQDVFGYNQFRQQQQAIVEHVISGQDALVLMPTGGGKSLCYQIPALARDGLAIVVSP 66

Query: 66  LIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQPRMLA 125
           LIALM DQV  L++LGV AA LNS+LSAE    +  ++  GE+K+LY+APERL+    L+
Sbjct: 67  LIALMQDQVEALQQLGVNAAFLNSSLSAEDNARITRQVVSGEIKLLYVAPERLMVGSFLS 126

Query: 126 FLQSLE----IALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTR 181
            L  ++    +ALFAIDEAHCVSQWGHDFR EY QL  L   FP+VPRIALTATAD  TR
Sbjct: 127 LLDEVQQHVGLALFAIDEAHCVSQWGHDFRPEYRQLTILHNRFPEVPRIALTATADAPTR 186

Query: 182 EEIVERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLA-ERRSDAGIVYCLSRKK 240
            EI+ +L+L++A +F+SSFDRPNI Y +  K   R+QL AFL  E  +DAGI+YCLSR+K
Sbjct: 187 AEIISQLNLENARQFVSSFDRPNIRYHVGIKNNARQQLQAFLEREHPNDAGIIYCLSRRK 246

Query: 241 VDEVAAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV 300
           V+E AA+L E+G+ ALPYHAGLP  LR  HQ+RFL EEG+IMVATIAFGMGIDKPNVRFV
Sbjct: 247 VEETAAWLVEKGWSALPYHAGLPAQLRELHQRRFLREEGIIMVATIAFGMGIDKPNVRFV 306

Query: 301 AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLEQHK 360
           AHLDLPKS+E YYQETGRAGRDGL A+AWM YG+ DVV ++QML S E  E  KRLE+ K
Sbjct: 307 AHLDLPKSMEGYYQETGRAGRDGLQANAWMVYGMGDVVSMRQMLDSGEASEERKRLERLK 366

Query: 361 LDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTG 420
           LDA+L  CE T CR Q++L YF E  P  CG CDNC+  VETW AT+ A+ ALS ++RTG
Sbjct: 367 LDALLGYCESTTCRHQSILRYFGESHPGACGQCDNCLHPVETWQATQVAQMALSCVYRTG 426

Query: 421 QRYGVGHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLE 480
           QR+GVGHL+DVL+GK   +V  F H  +S FG+GK   +++W  ++RQL+A GL + D+ 
Sbjct: 427 QRFGVGHLIDVLIGKVTPQVERFNHDKVSTFGIGKTLNQNQWSGVYRQLIAAGLLEADMA 486

Query: 481 GYGGLRLSATCRPLLKGEVTLELRRDLKPATAVKSSK--SQASQLVRGEERDQ-WEALRA 537
            YGGL+L+   RP+LKGE  + LRRD +P   +  ++  ++A +   G   D  W+AL+A
Sbjct: 487 AYGGLKLTEAARPVLKGEQEVWLRRDAEPEKRMSKAERSARAKEAFEGANDDPLWQALKA 546

Query: 538 LRRKLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVL 595
            R +LA E GVPPYVIF DSTLLE+   +P +L EM ++SG+G  KL++YG+AFLQVL
Sbjct: 547 KRLELAREQGVPPYVIFHDSTLLEIHNRKPQTLDEMGQISGIGQAKLQKYGDAFLQVL 604