Pairwise Alignments

Query, 283 a.a., Flagellin protein FlaA from Pseudomonas fluorescens FW300-N2E2

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (451), Expect = 2e-49
 Identities = 89/161 (55%), Positives = 121/161 (75%)

Query: 1   MALTVNTNVTSLNVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRG 60
           MA+ VNTNV ++  Q+ L  A++A  TSM RLSSG KINSAKDDAAGLQI+ R+  Q RG
Sbjct: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  QTVAIKNANDGISIAQTAEGALQESTNILQRMRELAVQARNDSNGTADREALNKEFAQMS 120
             VA++NANDGISIAQTAEGA+ E+TNILQRMR+L++Q+ N SN  ++R A+ +E   ++
Sbjct: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120

Query: 121 DELTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQITL 161
           DEL RIAE+T+  G  L++G+  T +FQ+G++ G    +TL
Sbjct: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTL 161



 Score =  103 bits (258), Expect = 4e-27
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 10/170 (5%)

Query: 117 AQMSDELTRIAESTNLNGK-NLIDGSA---GTMTFQVGSNTGATNQITLTLDSGFDAATL 172
           A+  D++  +A  T +NG+ +++  S    G +    G+N   T  +     SG  A  L
Sbjct: 213 AKEGDDIEEVA--TYINGQTDMVKASVNEKGQLQIFAGNNK-VTGDVAF---SGGLAGAL 266

Query: 173 SVDSAAIAITGSDSTTAEASTSAAIVAIDAALATINSSRADLGAAQNRLTSTISNLQNVN 232
           ++ +       +   T+      ++  ID+AL  ++S RA+LGA QNR    ISNL N+N
Sbjct: 267 NMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNIN 326

Query: 233 ENAAAALGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLL 282
           EN  A+  R++DTDFA ET  LTK Q L QAS+SVLAQA Q P+A L LL
Sbjct: 327 ENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSLL 376