Pairwise Alignments

Query, 323 a.a., ErfK/YbiS/YcfS/YnhG family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 366 a.a., L D-transpeptidase from Erwinia amylovora T8

 Score =  193 bits (491), Expect = 5e-54
 Identities = 109/297 (36%), Positives = 158/297 (53%), Gaps = 6/297 (2%)

Query: 12  LSLAALCMAGHVAALELPLPPPGEDIVGQVQVIKAKYEDTFA--DLGTTYDLGYSEMVAA 69
           L  AA  ++    A+  PLP     + G+   I    +           Y +G S M+ A
Sbjct: 11  LIFAAAALSHSAFAVVYPLPAANSRLTGENLEITIPQDSKLPLEAFAAQYQMGLSNMMEA 70

Query: 70  NPGVDPWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYFPKGRNVVYTFPLGIGRE 129
           NP VD +LP AG+++++P + +LP  PREGIVIN AE RLYY+PKG   V   P+GIG  
Sbjct: 71  NPRVDVYLPEAGSKLIIPHQLLLPDAPREGIVINSAEMRLYYYPKGSKTVVVLPVGIGEL 130

Query: 130 GWGSPIAHTSII-AKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTP 188
           G  +PI  T+ +  K   PTWTP   +  E+AA G+ LP V PAGPDNP+G +   +G  
Sbjct: 131 GKDTPINWTTTVQRKKDGPTWTPTKKMHEEYAARGESLPEVFPAGPDNPMGLYALYIGRL 190

Query: 189 GYLIHGSNKKFGIGMRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDPYKLGLS-GGKVY 247
            Y IHG+N  FGIG+R SHGC R+   ++  +   VPVGT V+ I+ P K  +   G  Y
Sbjct: 191 -YAIHGTNANFGIGLRVSHGCVRLRAEDIKWLFSNVPVGTRVQFIDQPVKASVEPDGSRY 249

Query: 248 LEAHTPLDDKGNPSVVDKHTSVINAMLKREDITSNLRMNWDVVRDVVAAEDGMPVEI 304
           +E H PL  +       +    +      + + S++ +N   +   +    GMPV++
Sbjct: 250 VEVHNPL-SQTQEQFASRDPVPLTLSDSVKKVVSDVSVNSASMEAALRTRSGMPVKV 305