Pairwise Alignments

Query, 437 a.a., serine/threonine protein kinase from Pseudomonas fluorescens FW300-N2E2

Subject, 2385 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 53.5 bits (127), Expect = 7e-11
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 11   QLCGITRLDLT-CGLT-EFPREIFDVADSLEILNLSGNQLDTLPDD---LHRLTRLRVLF 65
            Q  G+T LDL+  G+T +      D    LE L LSGN+L  +P     +  LTRL + +
Sbjct: 1843 QFPGVTTLDLSGAGITAQGSAGFLDGFPDLETLYLSGNELGAVPAPVLHMRHLTRLDMQY 1902

Query: 66   CSDNRFTELPECLGRCSALTM-VGFKANRIAHVAGAALPP---LLRWLILTDNCVSRLPD 121
            CS    T +   LG     T+ + +   R+ +      PP   ++  L L  N +S  PD
Sbjct: 1903 CSLRSATSVYPLLGNSRLRTLDLSYNELRVFN------PPDYGVIESLDLRYNQLSEWPD 1956

Query: 122  ELGQRPYLQKLMLAGNRLQQLPASL 146
             + Q P LQ L L+GN + ++PA+L
Sbjct: 1957 GVLQAPGLQALNLSGNAIAEIPAAL 1981



 Score = 38.1 bits (87), Expect = 3e-06
 Identities = 40/135 (29%), Positives = 52/135 (38%), Gaps = 26/135 (19%)

Query: 29   REIFDVADSLEILNLSGNQLDTLPDDLHRLTRLRVLFCSDNRFT----------ELPEC- 77
            R+       +E L L G+    LP     L  LR L  S NR T           LP+  
Sbjct: 1529 RDFIRAFSHIETLELGGSTFTELPFAAQELPALRRLDVSGNRITVTAMVQRQLNALPQLV 1588

Query: 78   --------LGRCSALTMVGFKA------NRIAHVAGAALPPLLRWLILTDNCVSRL-PDE 122
                    LGR  A  + G +A      + +A   GA   P L WL L DN ++ L P  
Sbjct: 1589 RLNLSHNPLGRLDATALSGLEALNLRSTDLLAWPTGAETLPRLSWLDLRDNRIASLSPLA 1648

Query: 123  LGQRPYLQKLMLAGN 137
            L     L +  L+GN
Sbjct: 1649 LAHPDALMRTNLSGN 1663



 Score = 35.8 bits (81), Expect = 2e-05
 Identities = 35/131 (26%), Positives = 48/131 (36%), Gaps = 21/131 (16%)

Query: 53   DDLHRLTRLRVLFCSDNRFTELPECLGRCSALTMVGFKANRIAHVAGAALPPLLRWLILT 112
            D +   + +  L    + FTELP       AL  +    NRI   A              
Sbjct: 1530 DFIRAFSHIETLELGGSTFTELPFAAQELPALRRLDVSGNRITVTA-------------- 1575

Query: 113  DNCVSRLPDELGQRPYLQKLMLAGNRLQQLPASLGQCHRLELLRIAANQLTELPQWLLTL 172
                  +  +L   P L +L L+ N L +L A+      LE L + +  L   P    TL
Sbjct: 1576 -----MVQRQLNALPQLVRLNLSHNPLGRLDATA--LSGLEALNLRSTDLLAWPTGAETL 1628

Query: 173  PSLSWLAYAGN 183
            P LSWL    N
Sbjct: 1629 PRLSWLDLRDN 1639



 Score = 31.2 bits (69), Expect = 4e-04
 Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 22/151 (14%)

Query: 152  LELLRIAANQLTELPQWLLTLPSLSWLAYAGNPLE----TQAQATALNTTTPIEWSHLEL 207
            +E L +  +  TELP     LP+L  L  +GN +      Q Q  AL     +  SH  L
Sbjct: 1538 IETLELGGSTFTELPFAAQELPALRRLDVSGNRITVTAMVQRQLNALPQLVRLNLSHNPL 1597

Query: 208  QRQLGEGASGVIHQAL---------WQTPGQAARKVAVKLYKGQMTSDGSPLHEMH--AC 256
             R      SG+  +AL         W T  +   +++    +    +  SPL   H  A 
Sbjct: 1598 GRLDATALSGL--EALNLRSTDLLAWPTGAETLPRLSWLDLRDNRIASLSPLALAHPDAL 1655

Query: 257  ITAGRHSNLIEVLGQVAGHP-----EQQAGL 282
            +      N     G+ A H      EQQ GL
Sbjct: 1656 MRTNLSGNAFSADGEAAFHAALQRIEQQRGL 1686



 Score = 26.6 bits (57), Expect = 0.009
 Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 38   LEILNLSGNQLDTLPDDLHRLTRLRVLFCSDNRFTEL-PECLGRCSALTMVGFKANRIAH 96
            LE LNL    L   P     L RL  L   DNR   L P  L    AL       N  + 
Sbjct: 1608 LEALNLRSTDLLAWPTGAETLPRLSWLDLRDNRIASLSPLALAHPDALMRTNLSGNAFSA 1667

Query: 97   VAGAALPPLLR 107
               AA    L+
Sbjct: 1668 DGEAAFHAALQ 1678