Pairwise Alignments

Query, 372 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

Subject, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 27/216 (12%)

Query: 89  ESILKLSSRFATLSGDISASASHGADQ--------SSGARLLEILEVGQRDLDSIMVALR 140
           E++ + S +   L  D+ A  + G +         +S A +L   +    +LD I    R
Sbjct: 40  EAMQQQSRQNTDLYSDVIACQNQGGEMLNAVRDGIASSAEILTEEKESLSELDKIFDQTR 99

Query: 141 DALL-----------RKESQLKEVMLLSDFTSQLQEMAKFVGDIAQQTNLLALNAAIEAA 189
            A++           +  S ++ V  L+  TS + +    +  I++QTNLLALNAAIEAA
Sbjct: 100 VAIVNLGNRATYINKQATSSMQAVTELNSTTSSINQFVAAIQGISEQTNLLALNAAIEAA 159

Query: 190 RAGDAGRGFAVVADEVRKLSSLSGGTGQKISETVNAVNAAISRTVELSQHQAQQDSQTLA 249
           RAG+AGRGFAVVADEVR+L+S +     +I + V  +    S   E+  H  Q  +  +A
Sbjct: 160 RAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQASNIKEI-VHNNQNSALDVA 218

Query: 250 HSEQLVSQVIEHFRHNAQAIVDTSSSLQQQSENVAT 285
            S   + QV+E        ++  S+++QQ   N AT
Sbjct: 219 SSSTQIGQVVED-------VLQRSNNMQQVIHNAAT 247