Pairwise Alignments

Query, 640 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens FW300-N2E2

Subject, 633 a.a., Acetoin catabolism regulatory protein from Pseudomonas segetis P6

 Score =  306 bits (783), Expect = 2e-87
 Identities = 214/632 (33%), Positives = 337/632 (53%), Gaps = 46/632 (7%)

Query: 31  VIAQSWYRSV---IKHRLDPSSSARLDVLCAEDIRQHQQRHQQYLDIASQGVSGLARRVV 87
           ++  SW R     + H+  PS  + +      ++    +RHQ  +    Q V      ++
Sbjct: 13  IVEDSWSRCREFGLTHQTAPSFGSPV----RGEVSALLERHQSLVVTTHQEVLPYYGNIL 68

Query: 88  P-AGFAVLLSDEHGITLDARLPDQPVPYVRS-GLVVGARWDESIAGTNGIGTTLAAAEPL 145
             +   ++L+D  G  L +    + +   RS G V GA W E   GTN IGT L  A+ +
Sbjct: 69  ANSNCLIMLADNRGQVLQSWGDQRFLDAERSAGFVAGASWQERQTGTNAIGTALNCAQAV 128

Query: 146 IIHREEHFLTSNARLSCSVAPIFNAQGLLQGCLNATCLNSNGPKESQYLTLQLVILYARL 205
            I  +EH+L +N  ++ S +PIF+ Q  +   L+ +  +   P      TL +V + ++ 
Sbjct: 129 HIQHDEHYLKANRFMTGSASPIFDEQRQVIAVLDVSSDSYLPPSH----TLGMVKMMSQS 184

Query: 206 IENAH----FRQNYRDRLTLSLKPIDEIADLANEQLLALDDSGRVIGANHAAFVAHDQAH 261
           +EN      F+Q+Y  +LT +    +  +  A   L+  D+SG+VI AN  A    D   
Sbjct: 185 VENRLILNLFKQHYF-QLTFNTSLNNLESPWAG--LVVFDESGQVISANRRA----DNLL 237

Query: 262 GPHLLGGPIEQLLPMGVNELLRLTNGGARGLRLRAR---HDEALLDLSLRIPSS-DHRLA 317
           G  L    IE L  + + +LL   +G    L+   R   H      L    P++ D R  
Sbjct: 238 GTSLALVNIEMLFDVPLQQLLNQPSGQPFNLKAGGRFRFHAHITQPLQPVAPTARDFRRQ 297

Query: 318 PAPAKAQRPRHP------DLEQLAGDDPTLQQAVRRLHKVIDKDIAILITGETGTGKEAF 371
              A   +  H        L+ L+  D  + +A+++  ++I+KDI +LI GETG GKE F
Sbjct: 298 AKGAAISQDEHGLPADNLSLDNLSMGDARVDKAIQQAQRLIEKDIPLLIHGETGVGKEVF 357

Query: 372 ARAIHQASARRDEPFIALNCAAIPESLIESELFGYRGGSFTGADKKGMKGKLELANGGTL 431
            +A+H A +R  +P IA+NCAAIP  L+ESELFGY  G+FTGA++KG  G +  A+ GTL
Sbjct: 358 VKALHHAGSRAAQPLIAVNCAAIPSELVESELFGYEKGAFTGANQKGSSGLIRKADKGTL 417

Query: 432 FLDEIGDMPAHLQTRLLRVLAEREISPIGAPMPVSLDIQVICATHQDLQGMLRDKHFRED 491
           FLDEIGDMPA +Q RLLRVL ER + P+G+     ++I++I AT++ L+  +    FR+D
Sbjct: 418 FLDEIGDMPARVQARLLRVLQERCVQPLGSSENYPVNIRLISATNRTLRNDVEQGLFRQD 477

Query: 492 LFYRLNGMNLSLPPLRERSDRAQLIQRLLDSQAE-AKGVQLTAQARQCLLEASWPGNIRQ 550
           L+YR+NG++L LPPLRERSD+A L +RL     E  +   L+ +  +      WPGN+RQ
Sbjct: 478 LYYRINGLSLELPPLRERSDKAALFKRLWQQYREPQQWAGLSNEVLELFNAHPWPGNLRQ 537

Query: 551 LINALRYAVAMAEDGNVDVDCLPAELL-----------QGDAYARLASPSVGSEPPASNL 599
           L + ++ A+AMA+D  + ++ LP + +              A+A   +   G    AS+L
Sbjct: 538 LSSVIQVALAMADDQPIRIEHLPDDFIAELQAHQPATASSMAHANTGAGIHGGMSGASDL 597

Query: 600 LEILRRHRWNISAAAAELGVARSTLYRQMKKQ 631
            + L+    N+S  A  LGV+R+TLY+++++Q
Sbjct: 598 NQKLQACAGNVSQLARHLGVSRNTLYKRLREQ 629