Pairwise Alignments

Query, 318 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 311 a.a., D-allose transporter subunit from Klebsiella michiganensis M5al

 Score =  134 bits (338), Expect = 2e-36
 Identities = 97/303 (32%), Positives = 153/303 (50%), Gaps = 24/303 (7%)

Query: 5   FAGRLLAVAMLAAASAALPLSSAFAQTAEKPKVALVMKSLANEFFLTMEDGAKAYQKEHS 64
           F+G L+ V +  +A AA                A+V+K+L+N F++ M+ G +   K   
Sbjct: 8   FSGTLMGVMLSTSAFAAADY-------------AVVLKTLSNPFWVDMKKGIEDEAKTLG 54

Query: 65  ADFDLISNGIKDETDTANQIRIVEQMIVSKVDALIIAPADSKAMVPVIKKAVDAGITVIN 124
              D+ ++    E D  +Q+++ E +       +  AP  S  +V  + KA   GI ++N
Sbjct: 55  VSVDIFAS--PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVAKAWKKGIYLVN 112

Query: 125 IDNQLDPAVVKSKNINVP-FVGPDN----RKGARLVGEYLAKQLKAGDEVGIIEGVSTTT 179
           +D ++D   +K    NV  FV  DN     KGA  + + L  +   G EV IIEG +   
Sbjct: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAAFIIDKLGAE---GGEVAIIEGKAGNA 169

Query: 180 NAQARTAGFKDAME-AAQVKVVSLQSGDWEINKGNQVAASMLSEYPNIKALLAGNDSMAV 238
           + +AR  G  +A + A+Q+K+V+ Q  DW+  K   VA ++L   PN+KA+   ND+MA+
Sbjct: 170 SGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNVKAIYCANDTMAM 229

Query: 239 GAVSAVRAAGKAGKVQVVGYDNINAIKPMLKDGRVLATADQFAAKQAVFGIETALKILKG 298
           G   AV  AGK GKV VVG D I   + M++ G++ AT  Q  A     G++  +   K 
Sbjct: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATIAQNPADIGATGLKLMVDAEKS 289

Query: 299 EKV 301
            KV
Sbjct: 290 GKV 292