Pairwise Alignments

Query, 774 a.a., DNA damage response protein (yhgF like) (from data) from Pseudomonas fluorescens FW300-N2E3

Subject, 772 a.a., RNA binding S1 from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 1422 bits (3682), Expect = 0.0
 Identities = 725/774 (93%), Positives = 752/774 (97%), Gaps = 2/774 (0%)

Query: 1   MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY 60
           MDSINSRIAEELGVRPQQV AAVALLDEGSTVPFI+RYRKEVTGSLDDTQLRHLEERLRY
Sbjct: 1   MDSINSRIAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRY 60

Query: 61  LRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG 120
           LRELDERR+SILASIEEQGKLTP+L RDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
Sbjct: 61  LRELDERRVSILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG 120

Query: 121 LGELADGLFNDPNLTPDTEAARFVNAEKGVADVKAALEGAKYILMERFAEDANLLDKLRN 180
           LGELADGLFNDP+L P+ EAARFV+A+KGVAD+KAALEGAKYILMERFAEDA+LLDKLR+
Sbjct: 121 LGELADGLFNDPSLAPEAEAARFVDADKGVADIKAALEGAKYILMERFAEDASLLDKLRS 180

Query: 181 YLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG 240
           +LKQEA +SARV+ GKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEG LSSALKVG
Sbjct: 181 FLKQEAVISARVVPGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGFLSSALKVG 240

Query: 241 DELPGTMHPCEGMIGQQFGIANQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE 300
           +ELPG MHPCE MIG++FGI NQNRPADKWL EVVRWTWKVKLY+HLETDLLGELRDGAE
Sbjct: 241 EELPGAMHPCELMIGERFGIQNQNRPADKWLAEVVRWTWKVKLYSHLETDLLGELRDGAE 300

Query: 301 TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN 360
           TEAINVFAHNLHDLLLAAPAG RATLGLDPGLRTGCKVAVVDATGKLLD+ATVYPHVP N
Sbjct: 301 TEAINVFAHNLHDLLLAAPAGQRATLGLDPGLRTGCKVAVVDATGKLLDYATVYPHVPKN 360

Query: 361 KWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYPAMKMTKVMVSEAGASV 420
           +WDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYP +KMTKVMVSEAGASV
Sbjct: 361 QWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYPDLKMTKVMVSEAGASV 420

Query: 421 YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG 480
           YSASELA+KEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
Sbjct: 421 YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG 480

Query: 481 LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVTHRDENGAFKTRAALKKVARL 540
           LDAVVEDCVNAVGVDVNTASVALLARISGLN TLAQNIV HRDENGAFKTRAALKKV+RL
Sbjct: 481 LDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVAHRDENGAFKTRAALKKVSRL 540

Query: 541 GEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDP 600
           GEKTFEQAAGFLRVM GDNPLD+SAVHPEAYPLVQRIAAETDRDIRSLIGDA+FLKRLDP
Sbjct: 541 GEKTFEQAAGFLRVMTGDNPLDASAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDP 600

Query: 601 KKYTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVT 660
           KK+TDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQ+GVEDLKDLQLGMILEGVVTNVT
Sbjct: 601 KKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQDGVEDLKDLQLGMILEGVVTNVT 660

Query: 661 NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS 720
           NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
Sbjct: 661 NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS 720

Query: 721 DTPGEKIDGARGARPGSAPRQSSNPAPRKETTAAAPGNNAMASLFANAKQLKKR 774
           DTPGEKIDGARGARPGS+PRQ  N APRKETTA AP NNAMASLFANAKQLKKR
Sbjct: 721 DTPGEKIDGARGARPGSSPRQ--NNAPRKETTAPAPANNAMASLFANAKQLKKR 772