Pairwise Alignments

Query, 249 a.a., Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) from Pseudomonas fluorescens GW456-L13

Subject, 258 a.a., ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2E3

 Score =  197 bits (501), Expect = 2e-55
 Identities = 114/255 (44%), Positives = 159/255 (62%), Gaps = 10/255 (3%)

Query: 5   KKVFLAAAVTLA---FSAGAMAETLKMGIEAAYPPFNNKDASGNVVGFDKEIGDALCAKM 61
           KK+ L  A+ L+       A  + LK+GIEAAYPPF +K   G++VGFD +IG+ALC +M
Sbjct: 2   KKLVLLGALALSVLSLPTFADEKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCEEM 61

Query: 62  KVECTVVTSDWDGIIPALNAKKFDFLISSMSITDERKQAVDFTDPYYSNKLQFIAKKDID 121
           KV+C  V  ++DG+IPAL  +K D ++SSMSITD+RK++VDFT+ YY+   + + K    
Sbjct: 62  KVKCVWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNKYYNTPARLVMKAGTQ 121

Query: 122 FKTDKAALKGKIIGAQRATLAGTFLEDNYGD-DITIKLYDTQENAYLDLTSGRLDGILAD 180
              + A LKGK IG QR ++   F E+        IK Y +Q   YLD+ +GRLDG +AD
Sbjct: 122 VSDNLAELKGKKIGVQRGSIHNRFAEEVLKPLGAEIKPYGSQNEIYLDVAAGRLDGTVAD 181

Query: 181 -KYVNYEWLKSDAGRSYEFKG----DPVEESDKIGIAVRKKDPIR-EKLNTALKEIVADG 234
              ++  +LK+D+G+ + F G    D     D IGIAVRK D    +K+N A+  I A+G
Sbjct: 182 ATLLDDGFLKTDSGKGFAFVGPAFTDEKYFGDGIGIAVRKGDKAELDKINAAIVAIRANG 241

Query: 235 TYKKINDKYFPFSIY 249
            YK+I DKYF F IY
Sbjct: 242 KYKQIQDKYFNFDIY 256