Pairwise Alignments

Query, 301 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

Subject, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 6/281 (2%)

Query: 12  VARGGTLSAAAKMLGVKHSTVSRHLAGLEAEIRTRLVVRAPGGLTLTDAGLRLLEAAEAM 71
           V   G+ + AA+ LG+  S VS  +  LE  +  RL+ R    ++LT  G    + +  +
Sbjct: 27  VVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGDTFYQRSHGL 86

Query: 72  ELQAQTAQDEISGRDVSISGTVRIGAPDAFGAYFLSPRLTRLLDQNPALKVQLVATPRSF 131
              A+ A   ++     +SGT+RIG     G + L+P L     Q P +   +       
Sbjct: 87  LNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNFDIQLDDGLQ 146

Query: 132 NLTKREADIAIALTMPERGRLVTRKMATYGLGVFASAAYLADKPAIRSVDDLRRHRFISY 191
           +L     D+ I +       LV R +A + LG++AS  YL + P I ++ DL +H ++  
Sbjct: 147 DLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTIQDLEQHDWVYL 206

Query: 192 IDDLIFTRELDYLGEVATGIDAAF----QSSNLFAQMHAARAGLGVCILPYFLASGCPDL 247
               +  + L    +        F     S++    M   + GLGV  +  FL    PD 
Sbjct: 207 TRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSIASFLIDKLPDA 266

Query: 248 KLV--LPDAVRLVRSWWIIVHEEQKNIARVRITADFITQEL 286
            LV   PD  ++  +  I+    +    RVR+  D++   L
Sbjct: 267 SLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLVGTL 307