Pairwise Alignments

Query, 313 a.a., Ku domain protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 304 a.a., DNA repair protein from Cupriavidus basilensis FW507-4G11

 Score =  115 bits (289), Expect = 1e-30
 Identities = 81/311 (26%), Positives = 151/311 (48%), Gaps = 16/311 (5%)

Query: 2   ARPIWTGTLSFGLLNVPVSLMSG-ERKVDLHFRMLDSRDKKPIRFERVNADTGDEVPWKE 60
           A  I + +LSFGL+++PV L +  E +  + F  +  +D    + + V+  TG  V   +
Sbjct: 3   AHSIASLSLSFGLVSIPVKLYTATESQSAVKFNYM-CKDGSRAKQQYVSEKTGQVVERAD 61

Query: 61  IVKAFEYDKGSYVIVEEQDIRSAAPESHETVEVETFVDAADIDPRYFEKPYILVPGKKAE 120
           + K +E+DK  YV+   +++++    ++  VE+  F+    +DP Y++K Y + P K+  
Sbjct: 62  LQKGYEFDKDRYVLFSPEELKALEESANHVVEIVAFIPEKTVDPLYYDKAYFVAPDKRGS 121

Query: 121 KGYVLLRETMRDTGKVGIAKVVIRTREYLAAVMPQGDALILLLLRYQQEVVDPEDFKLPS 180
           K Y LL++ M  +G+  +AK   + + ++  + P  D L+   L +  EV   ++  +  
Sbjct: 122 KPYNLLKDAMLKSGRCALAKWASKGKTHMVQIRPAEDGLVFQQLLFADEVRSMKELHIEQ 181

Query: 181 GAVSEYRITAKEQEMAKQLI-ESMSGRWQPEDYHDEFRGKLEQILRKRIQAKGGTTQVDD 239
             VS+      E ++A Q+I ++    ++P  Y DE + ++ Q +  +I  K    Q+  
Sbjct: 182 VDVSD-----AELKLALQIIDQAAEDSYEPTQYEDEEKKRILQAIDAKIAGK----QIVS 232

Query: 240 EPAPHEDATTNVVDFMSLLQKSLQANTRTPAKKTTAAADTAPAKKTATKKAAKKATKKTA 299
                  A+  V+D M  L+ SL    R    K  AA   AP ++ A     ++ + K A
Sbjct: 233 PEQVEVSASGQVIDLMEALRASLAKGGR--KAKPPAATAKAPVEEVADLVTKERKSVKRA 290

Query: 300 TKATKKAAPRR 310
            K  +  AP R
Sbjct: 291 EKVAE--APSR 299