Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 510 a.a., transposase from Pseudomonas putida KT2440

 Score =  284 bits (726), Expect = 6e-81
 Identities = 173/480 (36%), Positives = 267/480 (55%), Gaps = 16/480 (3%)

Query: 50  DRTVIEKLTHEIAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQAKPASI 109
           D+  I  L  ++  L+   F ++SEQ   +    L    + +   +    +A +   A  
Sbjct: 29  DKGQIVDLKEQVKLLRDRLFNRKSEQTVESNTPQLALFNEPESQWVPTADDADEEVVAP- 87

Query: 110 ETKQKPKRTALPPQFPRT-LIHHEPDNT-QCACGCALKRIGEDVSEKLDYTPGVFTVERH 167
            +KQ+ KR  L    PR  +IH  P++   CACGC    +GE  SE+LD  P    V +H
Sbjct: 88  -SKQRGKRKPLSADLPRIEVIHDLPEHELTCACGCRKHVVGEQTSEQLDIVPMQIRVLKH 146

Query: 168 IRGKWVCDDCETL-IQAPVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGL 226
           +R  + C  CE+  + A  PAQ+I+K + +  +LA ++  KY D LPL+R E +  R G+
Sbjct: 147 VRKIYGCRGCESAPVTADKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGI 206

Query: 227 AIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVHADETPVQVLM-PGAKKTHRAYVWA 285
            IPR TLA+WV  C    QPL++ +R  +L   V+H DET VQVL  P    T ++++W 
Sbjct: 207 EIPRQTLARWVIQCSEHFQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWV 266

Query: 286 YASSAFADIKAVVYDFTPSRAGEHARRFLQDWKGKLVCDDFGGYKA-SFSLGVTEIGCMA 344
            AS    D + V++D+T SRA E   R L+ ++G ++ DD+ GY A +   GV  + CMA
Sbjct: 267 QASGP-PDRQVVLFDYTTSRAQEVPLRLLEGYRGYVMTDDYAGYNALALQPGVERLACMA 325

Query: 345 HARRKFFE---LHATNKSQLAEQALRYIQVLYEIEREVRDLEPDLRRRIRQEKAAPAMDV 401
           H RRKF E   +    K+  A+ AL  I  LY IER+++D   + R   RQE++ P ++ 
Sbjct: 326 HVRRKFVEAQKVQPKGKTGRADVALTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQ 385

Query: 402 LHTWMIAQRERMHDGVAIAKAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRK 461
           L +W+     ++     + KA  Y    W  L RY++ G +PIDNN AE+ I+P+ +GRK
Sbjct: 386 LKSWLDKTHSQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRK 445

Query: 462 NWLYAGSLRSGQRAAALMSLIQSAKLNGHDPYAYLKDVFTRLPTQRASEIAE---LLPHN 518
            WL++ + +    +A + SL+++AK+NG +PY +L+ V  RLP   AS +A+   LLP N
Sbjct: 446 AWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLP--HASSVADYEALLPWN 503