Pairwise Alignments

Query, 455 a.a., DNA repair protein RadA from Pseudomonas simiae WCS417

Subject, 454 a.a., DNA repair protein RadA (RefSeq) from Shewanella sp. ANA-3

 Score =  577 bits (1487), Expect = e-169
 Identities = 281/454 (61%), Positives = 356/454 (78%), Gaps = 1/454 (0%)

Query: 1   MAKAKRMYGCTECGATFPKWAGQCTECGAWNTLTETMIESGGAAAPTGRAGWTGQ-QAQI 59
           MAK K  Y C ECG  FP+W GQC+ C  WNT+TE  + +      T  AG+ G   +++
Sbjct: 1   MAKNKTAYVCNECGQDFPRWQGQCSACQEWNTITEVRLGAASPGRGTKFAGYAGAGSSEV 60

Query: 60  KTLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIASRM 119
           KTL ++ +  +PR  +  GELDRVLGGG+V GS +LIGG PG GKST+LLQTLC +A +M
Sbjct: 61  KTLDQIDLNALPRIVSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCHLAEQM 120

Query: 120 PALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIESIIATARIEKPKVMVIDSIQTIF 179
           PALYVTGEES QQVAMRA RLGLP ++LR+++ET +E I   A  E PKV+V+DSIQ + 
Sbjct: 121 PALYVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVEQICEVALQESPKVIVVDSIQVMH 180

Query: 180 TEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYF 239
              + S+PG VSQVRESA+ L R+AKQ+G A+ +VGHVTK+G+LAGP+VLEH +D  + F
Sbjct: 181 MSDVASSPGSVSQVRESASYLTRFAKQNGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF 240

Query: 240 EGESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMAT 299
           EG+SD R R LR+ KNRFGA+NELGVFAMT+RGLKEV+NPSAIFL+R +EE  GS+VM  
Sbjct: 241 EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGSLVMVV 300

Query: 300 WEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVV 359
           WEGTRP+LVE+Q LVD+S ++NPRRV +G+D NRLAMLLAV+HRHGG+   DQDVF+NVV
Sbjct: 301 WEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNVV 360

Query: 360 GGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHG 419
           GGVKV ET++DL L+ A++SS R   LP DL+VFGEVGLSGE+RPVP+GQERL EAAKHG
Sbjct: 361 GGVKVTETSADLTLLLAMVSSFRGDILPSDLVVFGEVGLSGEIRPVPNGQERLVEAAKHG 420

Query: 420 FKRAIVPKGNAPKESPPGITIIGVTRLEQALDAL 453
           FKRAIVP+ N PK+ P G+ ++GV +L +AL+A+
Sbjct: 421 FKRAIVPRANVPKKPPAGMEVVGVAKLSEALEAI 454