Pairwise Alignments

Query, 507 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  224 bits (571), Expect = 5e-63
 Identities = 113/230 (49%), Positives = 154/230 (66%)

Query: 182 QQHKEMIGQSKPHKRLVEEIKLVGGSDLTVLITGETGVGKELVAQAIHAASTRADKPLIS 241
           Q ++  IG S+  + +   I     S  ++ ITGE+G GKE+ A+AIHAAS R DKP I+
Sbjct: 127 QNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIA 186

Query: 242 LNCAALPETLVESELFGHVRGAFTGALNERRGKFELANGGTLFLDEVGELSLTVQAKLLR 301
           +NCAA+P+ L+ESELFGHV+GAFTGA  ER+G  E A+GGTLFLDE+ E+ L +Q KLLR
Sbjct: 187 INCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDLQTKLLR 246

Query: 302 VLQSGQLQRLGSDKEHQVDVRLIAATNRDLADEVRNGRYRADFYHRLSVYPLQVPALRER 361
            +Q+G  Q++GS K   VDVR + ATNRD   EV+ GR+R D Y+RL V PL +P LR R
Sbjct: 247 FIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRAR 306

Query: 362 GRDVLLLAGFFLEQNRSRMGLGSLRLTSDAQAALLAYNWPGNVRELEHLI 411
           G DV+ +A   L       G   +RL+++       Y WPGNVR+L++++
Sbjct: 307 GDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVL 356