Pairwise Alignments

Query, 235 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 9/210 (4%)

Query: 26  HMQEVHRAVVGDSLRVGRIGGLMGNAQLLRL--EATEAELQVSVDQPPPAKLPLTLLLAL 83
           ++  V R   G ++++    G     +LL +  +    EL   +   P + L + L   L
Sbjct: 26  YIGRVLRLTAGSAVQLFDGSGDEFRGELLEVGKKTVTVELHEHLKGMPESALQIHLGQGL 85

Query: 84  PRPKMLRRVLQTVAAMGVPKVVLVNSYRVEKSFWQTPFLEPEAIREQL-ILGLEQARDTV 142
            R + +   +Q    +GV ++  + S R E         +  A   Q+ I   EQ   +V
Sbjct: 86  SRGERMDWAIQKATELGVAQITPIISERCEVRLNDERADKRLAHWRQIAISACEQCGRSV 145

Query: 143 LPEIIIEKRFKPFVEDRLPAMAAGSLGLIGHPGDYPACPRGLDEPVTLAIGPEGGWIPYE 202
           LP I      + ++           L L+ HP   P         +   IGPEGG    E
Sbjct: 146 LPIIHAPVSLRDWLA------VEAELKLVLHPIAEPLASHAKPRTLAFLIGPEGGLSENE 199

Query: 203 VDLLTQAGLQPVQLGARILRVETAVTALLA 232
           V+     G  P +LG R+LR ETA    L+
Sbjct: 200 VEQAAVQGFLPARLGPRVLRTETAPVVALS 229