Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 402 a.a., type II secretion system protein F from Pseudomonas simiae WCS417

 Score =  171 bits (434), Expect = 3e-47
 Identities = 118/396 (29%), Positives = 197/396 (49%), Gaps = 2/396 (0%)

Query: 2   SLFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEAAGSPLLRNPRGQLKGAA 61
           +L+ +  ++ +G   +G     +     A L K+G+    +    SP+L +    +    
Sbjct: 6   TLYAWEGINRKGRRVSGQTTGHNPALVKAQLRKQGICPGHVRKK-SPVLSSLAASITSTD 64

Query: 62  LVSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPLSAALEEEGG 121
           +  FT+QLATLL AG PL ++  ++ +      +R  +  ++  ++AG  L+ AL ++  
Sbjct: 65  ITLFTRQLATLLKAGIPLLQAFDIIAEGFDNRALRERVQGLKQAIEAGTSLAEALRKQPR 124

Query: 122 SFSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLVVGVLGSLAL 181
            F  LY ++V AGE  GALE  L +++ + E+SE+L+  +  A+ YP  ++V       +
Sbjct: 125 CFDELYCNLVAAGEQAGALETLLERVAIHREKSEQLKTRIKKAMTYPITVLVVASLVTGV 184

Query: 182 LLAYVVPQFVPIFQDLGVPIPWITEVILALGEFL-GAYGLLVLAGLIVSGGCWAARLRNP 240
           LL +VVPQF  +F  +   +P  T  ++ L EF+  A+  + L GL    G   A  R  
Sbjct: 185 LLVHVVPQFQNLFAGVDGKLPGFTLQVIGLSEFMQKAWWAVALGGLAGGLGLREAYRRLA 244

Query: 241 AFREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQVCTNRALQA 300
            FR   D  LL     G LL +   AR  RTL T  + GV LLQAL        +   + 
Sbjct: 245 DFRLWLDSCLLKAPVAGKLLSKSAVARFARTLSTTFAAGVPLLQALDSVAGAAGSGPFRR 304

Query: 301 QVGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADIFDVEAKRG 360
            +      V  G  L  +  +  L P +A+QM  +GE++G LD ML KVA+ ++ +    
Sbjct: 305 AIEQMRRDVATGMPLNQSMLTSGLFPGMAIQMTAIGEESGTLDRMLEKVANHYEADVDNL 364

Query: 361 IDRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTS 396
           +D L   + P + VV+  +V  +++A+ LP+  L S
Sbjct: 365 VDHLTHLMEPLIMVVLGGIVGALVIAMYLPVFQLGS 400