Pairwise Alignments

Query, 219 a.a., glutamine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  108 bits (269), Expect = 2e-28
 Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 6/203 (2%)

Query: 19  GAAQTLSISFLSIAFSTVGGVLYGVLRTLNNRLINAVLRVYLELFRAIPVLVWLYLLFFG 78
           G   TL +S +S     + G+  G+ R  +N  +  +  +Y+EL R  P+LV +++ +F 
Sbjct: 120 GLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYF- 178

Query: 79  LPIFFG--LSLPSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREAGLSIGLSDPQLYG 136
              F G  L+L   +  +  LSL+  + V E+VR  + S+ RGQ EA  S+GLS  Q   
Sbjct: 179 ---FIGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSMR 235

Query: 137 YVLLPQALKRMTPPTLNVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLIYGVLFL 196
           +V+LPQA KR+ PP    +  ++K +SL  +I + +++K G+++I  ++    I   +  
Sbjct: 236 HVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAG 295

Query: 197 FFFFICYPLSAASKVLERRWTQA 219
            +  I  PLS  +  LERR  Q+
Sbjct: 296 LYLLINLPLSKMASRLERRLAQS 318