Pairwise Alignments

Query, 366 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 356 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  152 bits (384), Expect = 1e-41
 Identities = 103/344 (29%), Positives = 171/344 (49%), Gaps = 2/344 (0%)

Query: 17  LLAGCGHEEAAQTTIRPAMVVQPQPSSQ-SMDSYPGEVRARYEPDLAFRIGGKVSKRLVE 75
           LL  C  E+A    +RP + ++ +   Q ++  + G ++ARYE +L FR+ G++++R+V+
Sbjct: 13  LLVACSKEDAPPEPVRPVLSMEVKAEDQENLGRFAGTIQARYESNLGFRVPGRIARRVVD 72

Query: 76  EGERVKANQALAELDPQDVRLQLEATRAQVAGAEANLSLVRAERDRYKTLMDRQMVSRSQ 135
            G  V+    LA LDP D + QL + +  +A  +A     +A   R + L +R + +++Q
Sbjct: 73  VGAEVEKGALLAVLDPTDQQNQLRSAQGDLARVQAQYINAQANARRQQELFNRGVGAQAQ 132

Query: 136 YDNSENLYRAGVARLKQIKAEFDVASNQAGYAVLRAPQDGVVAKRVVEVGQVVSAGQTVF 195
            D ++   +   A L Q KA  + A++Q  YA LR    G+V     E GQVVSAGQ V 
Sbjct: 133 LDIAQTDLKTTQATLDQAKASVNQANDQLRYAELRTDHAGIVTAWNAEAGQVVSAGQQVV 192

Query: 196 TLATDGEREVLISLPEQGFGRFKIGQPVSVELWSQPDQRFTGRIRELSPAADPKSRTFAA 255
           TLA    +E +I LP     R        V     P    T  +RE+ P A   +RT  A
Sbjct: 193 TLARPDIKEAVIDLPAGLAERLPPDVVFLVAGQLDPSVNTTAIVREIEPQAQSATRTRRA 252

Query: 256 RVAFTGGKVPAELGQSARVFIQVDGDIPLSVPLSALSAENGASYVWRVQP-DNTLKRTPV 314
           R+  T       LG +  V +       + VPLSAL   +G + +W +     T++   +
Sbjct: 253 RLTLTETPPAFRLGTAISVTLSTAIAPRIEVPLSALQEVDGKTRIWLLDTHSQTVQTRDI 312

Query: 315 RIGAFGEKTVPVLEGLSPTDWVIAAGVHVLHEGQQVRPVDRSNR 358
            + +    +  + +G+ P + ++ AGV+ L  GQ+V+  + S R
Sbjct: 313 SVISRDADSALLNDGVKPGERIVIAGVNSLKPGQKVKIDEDSPR 356