Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 173 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 93.2 bits (230), Expect = 2e-24
 Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 35  MEALVSRRVGCRATAADLVQDLFLRFWRRPLVQVEELSTYLLRCAGNIAIDHLRSEGARA 94
           ++A + RR G  + AAD+VQD ++R     +   + +  YL R A N+AIDHLR +GARA
Sbjct: 21  LKAFIVRRTGSPSLAADVVQDTWVRAASAEIAMPDNVRAYLYRMAANLAIDHLRRDGARA 80

Query: 95  RS-SEGWLPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPERTRQIFLLNRIHGRKYAQI 153
           R   E  L E   +        + A  +L  +  A+  LPE+ R +FLL R  G    Q+
Sbjct: 81  RGLCEETLLEDIPSAEPAVDRVVAARQELAILSRAVAELPEKCRIVFLLYRGRGLTMKQV 140

Query: 154 AKAMGLSQSAVEKHMMRALEACK 176
           A  +G+S+ AVEKH+ RA+  C+
Sbjct: 141 AARLGISEKAVEKHIARAMVHCR 163