Pairwise Alignments

Query, 329 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 23/294 (7%)

Query: 10  DLEAQARDWLVRLTSGRATTVDAQDFKRWCGRSPLHAQVMAETSRLWDATRPAAEAVAQR 69
           D + +A  W   L          Q F  WC +   +A   AE    W   +PA       
Sbjct: 30  DPQQEALAWFSLLRQPGCDETQRQAFAAWC-QVQENAHAYAELETFWQQLQPAP------ 82

Query: 70  MRAAEASPRAAVAAIAHPGRRYFLGAALAAGAAAFVVVRPPARLWPALSDMTADYSTATG 129
              A   PR      +H G+   L   L   AAA++        WP +  + ++  T  G
Sbjct: 83  ---ARPRPRHVTVRRSHLGKGLALAFLLGLAAAAYLY-------WPLMQRLASELHTDVG 132

Query: 130 EQRQVVLADSVVVEMNTQTSFNLARGAEGEPAALDLLAGEAQV-LLNTARAAPFTLTAGG 188
           E+R + LAD   + +++ ++ N+     G    L L+ G+  + ++   RA    +   G
Sbjct: 133 ERRSIRLADGTTLNLDSASAMNV--DLRGRTRQLHLVQGQVHLEVVLDGRAMDVEV---G 187

Query: 189 GKLVAAAGSRFNVRATGSEVCVTCLAGSVELNYGGRVLVAAESQQINYGGRRAELARKPD 248
              +   G+R  +        +   +G   +  GG   + +  +++ +   R +  RK D
Sbjct: 188 NARIQVYGTRLQIARHAGRDELVVFSGKAMVTQGGEQRMVSAGERVTFDDTRIDPVRKAD 247

Query: 249 LSVVNAWRDRVLVFNDTPLSAVVEEINRYRPGRLIVTNAELGRRKVQARLRLEQ 302
           L   ++WR+  L   D PL  V+E +  Y+  RL + + ++  R+V     L+Q
Sbjct: 248 LKTADSWRNGRLKATDMPLRQVLERLAGYQGQRLWMMDEQVAHRRVSGDFNLDQ 301