Pairwise Alignments

Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  336 bits (862), Expect = 1e-96
 Identities = 193/498 (38%), Positives = 296/498 (59%), Gaps = 6/498 (1%)

Query: 17  LLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRI 76
           +L +  I K F  V  L   SL    G+V A+ GENGAGKSTLMKVL GI++ D G I  
Sbjct: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64

Query: 77  GGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHE-PSRWGVIDRKAMNAGAE 135
            G+PV F  P  ++ AGI+IIHQEL L+P  T+A+NIFLG E  S +G I    M+  A+
Sbjct: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124

Query: 136 AALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFDL 195
             L R+  +   +T  G LS+ EQQMVEIAKA+S +++++++DEPT AL D E+  LF++
Sbjct: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184

Query: 196 IAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGRELS 255
           I ELR  G  ++YISHR+ E+  + DDI+V++DG+ +      +   + ++ +MVGR+L 
Sbjct: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244

Query: 256 DFYPPAAANPPGAEVFAVEQGGNEVLHGIDLRLHAGEIVGVAGLEASGKVELARALFGER 315
           + YP  AA      +  +   G+ V H +   L  GEI+GV+GL  +G+ EL + ++G  
Sbjct: 245 EQYPRIAAQQGDISLEVIGLTGSGV-HDVSFTLKKGEILGVSGLMGAGRTELMKVIYGAL 303

Query: 316 RFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAALTLRALAGPL 375
              RG +          SP++    GI Y+ +DRK +GL L  S+++N  ++L AL    
Sbjct: 304 PSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKEN--MSLCALDQLS 361

Query: 376 AGAGSAARSRSL-IDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMAREPRLWVICE 434
            G         + +D  +    ++    +  +G LSGGNQQKV +A+ +  +P++ ++ E
Sbjct: 362 KGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDE 421

Query: 435 PTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVAH-LPRG 493
           PTRG+DVGAK  IY+L+  +   G ++++VSS++ E++G+ DRI VM  GRI    +   
Sbjct: 422 PTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASE 481

Query: 494 ASEEAVIAQAVRHDVAEA 511
           A +E ++A AV  + A A
Sbjct: 482 ADQEKLMACAVGRNPAHA 499